Panicum virgatum (switchgrass): 120690484
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Entry
120690484 CDS
T07260
Name
(RefSeq) beta-amylase-like
KO
K01177
beta-amylase [EC:
3.2.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120690484
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.2 beta-amylase
120690484
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Motif
Pfam:
Glyco_hydro_14
Motif
Other DBs
NCBI-GeneID:
120690484
NCBI-ProteinID:
XP_039829076
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Position
2K:59371929..59374698
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AA seq
644 aa
AA seq
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MRLTPTTPFAGATTSRPGLFPCSTLPKRNKSLRVTPMPWRANHGRPYNIIRHTPKPQSVD
RNTAETLRIMLRSSPASPVKPQQWTVCRSGAAVVASPPPVVAVAPRTVASAPLRALTTES
AETHPVPEPPPLFADDDEETMLASYVPVYVMLPLDVMSTENELEDAEGLRRQLRRLRGAG
VDGVMVDVWWGIVEGAGPGRYEWRAYRELFGVVQAEGLKLQAIMSFHACGGNVGDAVSIP
IPRWVREVGEADPDVFYTSPGGVRNQEYLTIGVDDKPLFHGRTAIQLYADFMRSFRENMA
DFLDSGLIVDIEVGLGPAGELRYPSYAETQGWVFPGIGQFQCYDKYLAADFKAAAAAAGH
PEWDLPRDGGEVNDTPEDTGFFAAEGGTYLSEQGRFFLTWYSSRLIAHGDRVLDEANRAF
LGCPVKLAAKVSGIHWWYRHPSHAAELDAGYYNLGGCDGYRPIARALARHGGAVLNFTCA
EMRDAEQPAGALSSPERLVRQALSAGWREGAEVACENALSRYDRAGYNQMLLSARPNGAG
GRRVAAVTYLRLSDELLAGNNFRIFRTFVRKMHAGLDYCPDPARYGRPMRPLERSAAEIP
MERLLEATAPAPAFPFDAETDMSVGGGLAEAIDWVIGKIEWIFG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcacaccaaccacacccttcgcgggcgccaccaccagcaggccagggctcttc
ccctgctccacattgccgaaacggaataaatcgttgcgcgtcacgccgatgccatggcgc
gccaaccacggccgcccatataatataatccggcacacgccaaagccacaaagcgtcgat
cgaaacacggcagagacactgcgcatcatgctccggagctcgccggcgtcgccggtcaag
ccgcagcaatggacggtgtgccggagcggcgcggcggtggtggcgtccccgccaccggtg
gtggccgtcgcgccgaggacggttgcctccgctcctctccgcgccctgaccaccgagtca
gcggaaacgcatcccgtgcctgagcctccgccattgttcgccgacgacgatgaggagacg
atgctcgccagctacgtcccggtctacgtcatgctcccactggacgtgatgagcaccgag
aacgagctggaggacgcggaggggctccggcggcagctgcggcggctgcggggcgccggc
gtggacggcgtcatggtggacgtgtggtggggcatcgtggagggcgccgggcccgggcgg
tacgagtggcgcgcgtaccgagagctgttcggggtcgtgcaggccgaggggctcaagctg
caggccatcatgtccttccacgcgtgcggcggcaacgtcggcgacgccgtcagcatcccg
atcccgcgctgggtgcgggaggtcggcgaggccgaccccgacgtgttctacacgagcccc
ggcggggtgaggaaccaggagtacctcaccatcggcgtcgacgacaagcccctgttccat
ggcaggacggccatccaattgtacgccgatttcatgaggagcttcagggagaacatggcg
gacttcctggactccggcctcatcgtggacatcgaggtcgggctcggccctgccggggag
ctgaggtacccgtcctacgcggagacccagggctgggtgttccccggcatcgggcagttc
cagtgctacgacaagtacctggcggcggatttcaaggctgcggcggcggcggccgggcac
cccgagtgggatctaccccgcgacggcggggaggtcaacgacacgccggaggacacgggg
ttcttcgcggcggagggagggacctacctgagcgagcaggggaggttcttcctgacgtgg
tactccagccggctgatcgcgcacggcgaccgggtcctcgacgaggcgaacagggcgttc
ctggggtgcccggtgaagctggccgccaaggtgtccgggatccactggtggtaccggcac
ccgagccacgccgcggagctcgacgccgggtactacaacctgggcggctgcgacgggtac
cggccgatcgcgcgcgcgctggcgcggcacggcggcgcggtgctcaacttcacgtgcgcg
gagatgcgggacgcggagcagcccgcgggggcgctgagctcgccggagcggctggttcgg
caggcgctgagcgccgggtggcgggagggcgccgaggtggcgtgcgagaacgcgctgagc
cggtacgaccgggccgggtacaaccagatgctcctgagcgcgcggcccaacggcgcgggc
ggccgcagggtggcggcggtgacgtacctgcggctgtcggacgagctcctggcgggcaac
aacttccggatcttcaggaccttcgtcaggaagatgcacgccggcctggattactgcccc
gatccggcccggtacgggcggcccatgaggcctctggagcggtcggcggcggagatcccc
atggagcggctgctggaggcgaccgcgccggcgccggcgttcccgttcgacgcggagacc
gacatgagcgtcggcggggggctcgccgaggccatcgactgggtgatcggcaagatcgag
tggatattcgggtag
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