Panicum virgatum (switchgrass): 120690532
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Entry
120690532 CDS
T07260
Name
(RefSeq) small GTPase LIP1-like
KO
K07933
Rab-like protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pvir04031
]
120690532
GTP-binding proteins [BR:
pvir04031
]
Small (monomeric) G-proteins
Unclassified
120690532
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Gene cluster
GFIT
Motif
Pfam:
Roc
Ras
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_16
SRPRB
RsgA_GTPase
AAA_29
Dynamin_N
MCM
ABC_tran
Hpr_kinase_C
nSTAND1
Sigma54_activat
DUF815
AAA_7
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
120690532
NCBI-ProteinID:
XP_039829150
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All DBs
Position
9N:complement(72007274..72011442)
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AA seq
338 aa
AA seq
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MFWKDSGSRSSSGSGRDQSGVGPFGQVRVLIVGDSGVGKSSLVHLILKGSGVALPAQKVG
CTVGIKHITYGSTGGSSSNVSDAERNFFVELWDVSGHERYKACRSIFYTQINGVIFVYDL
SQRKSKSNLSKWAVEVAETGTFLAPLGSGGPGGLPVPYLVIANKVDLVPRDGTRASSGNL
VDLARHWAEKQGLLRCSEELPLTESFPGNSGLLSAAKQARYDKEALIKFFRMLIRRRYFS
NEPPAPSPWSLTPREDTILPVETLGDGTDSFQRKSLSGEGFLYNGVVPLPAQRNLAPPPT
LNPQQPVLSLDNYRYHRFSSSSLPDGSSGRTSREDMNV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgttttggaaggatagcggcagccggagcagcagcggcagcggccgggatcagagcggc
gtggggcccttcggccaagtgcgcgtcctcatcgtcggtgattcaggtgttgggaaatct
tcactggttcatctcattttaaaaggttctggtgttgctctgccagcacaaaaagtagga
tgcacagtgggcattaaacatattacttatggtagtacaggtggttcatccagtaatgtc
agtgatgctgaaaggaatttctttgttgagctttgggatgtctcaggacacgaacgatac
aaagcatgtcggtcaattttctatacacaaatcaacggggtcatatttgtttatgacctt
tctcagaggaagtccaagtcaaacttgagtaaatgggctgttgaagttgctgaaacgggc
accttcttagctccactcggatctggtggacctggaggacttccagtgccttatctggta
atcgctaataaagtggatcttgtgccaagagatggtacaagagcaagcagcgggaatctt
gttgatcttgctcgccactgggctgagaagcagggccttcttcggtgtagtgaagaactc
ccactcacagagagctttcctgggaactctggcctcctgtcggctgccaagcaagcaaga
tatgacaaagaagcactgatcaagtttttccgcatgttgatcaggagaagatacttttca
aatgagcctcctgccccaagtccctggtctcttactccaagagaagataccatccttcct
gtagagactcttggagatggcacggatagcttccaaaggaaaagccttagtggtgagggc
tttttgtacaatggagtagtcccacttccagctcagaggaacctcgcaccgccaccaact
ctgaatccgcagcagcctgtgttgtccttggataactacaggtatcaccggttctcctcc
tcgtcgcttccggacgggagcagcggtagaacaagccgagaagatatgaatgtatga
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