Panicum virgatum (switchgrass): 120690679
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Entry
120690679 CDS
T07260
Name
(RefSeq) protein-tyrosine-phosphatase IBR5-like isoform X1
KO
K04459
dual specificity MAP kinase phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120690679
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120690679
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120690679
3.1.3.48 protein-tyrosine-phosphatase
120690679
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
MAPK phosphatases
120690679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
PTP-SAK
Init_tRNA_PT
Tc-R-P
SCNM1_acidic
DUF3027
PTP-NADK
Y_phosphatase2
Y_phosphatase3
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
120690679
NCBI-ProteinID:
XP_039829356
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Position
9N:complement(55558123..55561761)
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AA seq
270 aa
AA seq
DB search
MRKRERENPCGICGHYHKYEEGEVCGVCGHRWKPSDGEGTPAKHESAFPTEVLKDFLFLG
SYNNASRSEVLKTLSVSHILNTVPDCQNLYKNSFTYHRLQRDRPLDFDDANQFLEQCERD
KLRLLVHCMTGKNRSAAVVAAFLMKSRGWRLAQSFQWVKDRRQQVQLTDASQNVLLEYEQ
KLFGPSSQPVIPTESFVSLGFGYPKPAGDTQAPAFNQMTAPSIFQRVGPNVFPLNFAFGA
EGTVGVNPDNNDNGGAKANPASTDNPMDSS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcgggagcgggagaacccgtgcgggatctgcgggcactaccacaagtacgag
gagggggaggtctgcggggtgtgcggccaccgctggaagccgtcggacggggagggcacc
ccggcgaagcacgagtccgccttccccaccgaggtgctcaaggacttcctcttcctcggg
agctacaacaacgcctcccgctccgaggtcctcaagacgctcagcgtctcacacatcctc
aacactgtgcctgattgccaaaatctatacaagaattcattcacatatcacaggcttcag
cgtgacaggcctttggattttgatgacgcaaaccagtttctagaacaatgtgaaagagat
aaattacgccttcttgttcattgcatgactggaaaaaacaggtcagcagctgttgttgcc
gccttcttgatgaagtctagaggatggagacttgctcagtctttccagtgggtgaaagac
cggcggcagcaggttcaactgacagatgcttctcagaacgtgcttctggagtacgagcag
aagctttttgggcccagttctcaacctgtgattcccactgaatcatttgtttctcttgga
tttggttacccaaaaccagcaggtgacacccaagcacctgcgttcaaccaaatgaccgcg
ccatccatttttcagcgagtcggcccaaatgttttccccctgaattttgcttttggagcc
gaggggacagtgggagtcaacccagataacaatgacaatggtggggccaaggccaaccca
gcttcgactgataacccgatggacagctcttaa
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