Panicum virgatum (switchgrass): 120690693
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Entry
120690693 CDS
T07260
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120690693
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
120690693
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120690693
Prokaryotic type
120690693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
120690693
NCBI-ProteinID:
XP_039829383
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All DBs
Position
9N:41769819..41773352
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AA seq
511 aa
AA seq
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MPPANAPASSTPVHASRVRVLHPGGGRTTGPVVYWMLRDQRLADNWALLHAAGLAAASAP
AAPVAIAFALFPRPFLLGARRRQLGFLLRGLRRLAADARARSLPFFLLEGGPAEVPALVR
RLGASALVADFSPLRPVREALEAVVGELRRDVADMAVHQVDAHNVVPVWAASGKLEYSAK
TFRGKVSKVMDEYLLEYPELPALMPWDGEQPVDVDWDTLIYRICSEAENVPEIDWCKPGE
AAAMEVLLGSKDGFLTKRIKNYDMGRNDPTKPRALSCLSPYLHFGHISAQRCALEAKKRR
HLSPKSVDAFLEELIIRKELADNFCYYQPHYDSLAGAWEWARKTLMDHAADKREHIYTRE
QLENAKTSDPLWNASQLEMVHLGKMHGFMRMYWAKKILEWTSGPEEALSVAIYLNDKYHI
DGRDPNGYVGCMWSICGLHDQGWKERPVFGKIRYMNYAGCKRKFDVDAYILYVKRLVAQA
KKRKAEEARDTVSKHPKSRAIQQLNMSKTLI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggccaacgcaccggcgagctccacccccgtacacgcatcccgcgtgcgggtc
ctccacccgggagggggccgtacgacggggccagtggtgtactggatgctgcgggaccag
cgtctggcggacaactgggccctcctccacgcggccggcctcgccgctgcgtccgccccc
gcggctccggtcgccatcgcattcgctctattcccacgccccttcctcctcggcgcgcgc
cgccgccagctggggttcctcctccgtggcctccggcgcctcgccgccgacgcgcgcgcc
cgcagcctcccgttctttctcctcgagggcgggcctgcggaagtgccggcgctggtgcgg
cggctcggagcatctgctctcgtcgccgacttctcgccgctgaggccagtgcgtgaggca
ctggaagccgtcgtcggtgagctgcggcgcgacgtcgccgacatggccgtgcaccaggtg
gacgcacataacgtggtacccgtctgggcggcgtcggggaagctggagtactcggccaaa
accttcagaggcaaggtgagcaaggtgatggacgagtacctgctggagtaccccgagttg
ccggcgctgatgccatgggatggggagcaacctgtggatgttgactgggacacgctgatc
tacaggatttgcagtgaggcagagaatgtgccggagattgattggtgcaagccaggggag
gctgcagcaatggaggtgcttcttgggagtaaggatgggttcttgacgaagaggatcaag
aactatgacatgggccggaatgatcctacaaagccacgtgcattgtcgtgcctttccccg
tacttgcactttgggcacatttcagcacagcggtgtgctctggaggcaaaaaaacgccgc
catcttagtccaaagtctgtggatgcattcttggaggaactgataataaggaaggaacta
gctgacaacttctgctattaccagcctcactatgattcactggctggtgcatgggagtgg
gctagaaaaacattgatggatcacgctgctgataaaagagagcatatatatacgagggag
cagcttgagaatgcaaaaacatctgatcctctgtggaatgcatcacagttggagatggtg
caccttggaaaaatgcatggatttatgcgaatgtattgggctaaaaagattctagaatgg
acaagtggacctgaagaagcactttcggtagcaatatatttgaatgacaagtatcatata
gatggcagggaccccaacggctatgttggttgcatgtggtctatatgtggcctccatgat
cagggttggaaggagcggccagtatttggaaagatacgttacatgaattatgctggttgc
aaaagaaaatttgacgtcgatgcttacattttgtatgttaaaagattggttgctcaggcc
aagaagaggaaagctgaggaagctcgggatacagtgtcaaagcatccaaagtctcgggcg
attcagcagttgaacatgtctaaaactttgatataa
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