Panicum virgatum (switchgrass): 120690696
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Entry
120690696 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120690696
KO
K08497
protein transport protein SEC20
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120690696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120690696
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
120690696
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
120690696
NCBI-ProteinID:
XP_039829390
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All DBs
Position
9N:19168279..19174149
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AA seq
282 aa
AA seq
DB search
MDEVTQAVENLKKEWSQAVSQLEESIATIKSCGKAGKGTEEANSLPRLNGSAQDALQLLK
SLQFRLDLLAQQLPTFEEVQSGQATLQSWDEQYKKLRASLRNANLQAKENIRKAAQEERE
LLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRSRQMMVQEVERSASTLATFDESTSV
LQKAEGEYQGHRSLLMRTRGLLSTMQRQDVLDRVILTVGFIIFSLAVLYVVSRRIGLLTL
QRKLADAIRSGSLSAEDIVAKAQPGPAAANVPAPAPPIYDEL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttacacaagctgttgaaaatctgaagaaagaatggagccaagcggtttca
cagcttgaggagagcattgctacaatcaaatcatgtggaaaagcagggaaagggacagag
gaagcaaattctcttccaaggttgaatggttctgcgcaggatgctctgcaattgctcaag
tcactgcagtttcggcttgatcttctagcgcagcagctacctacttttgaagaagtgcaa
tccggccaagcaaccttacagtcatgggatgaacaatacaagaagctgcgtgctagtctg
aggaatgctaacttacaagctaaagagaacattagaaaagctgctcaagaggagagggag
cttcttcttgggggtggagaagagtctaccatccgcaggcgtaatctccagacaaaggct
gggatgacatctgctgctgaaagtatcactgagagcctccgacggtctcgccagatgatg
gttcaggaagtggaaagaagtgcaagtaccttggcaacatttgatgaatcaactagtgtt
ctccagaaggctgaaggtgaatatcaaggacaccgctctttgctgatgcgtacccgtggt
ttgctctccacaatgcaacggcaagatgttcttgatagggtcatcctgactgtcggcttt
atcattttctccttggcggttctctatgttgtttcaagacgtattggtctgttgacgctg
caaaggaaactggctgatgccatcagatcaggttcattatcagctgaggacatcgtagca
aaagcccagcctggacctgctgcagccaatgttccagctcccgcccctcccatttacgat
gaactgtga
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