Panicum virgatum (switchgrass): 120690723
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Entry
120690723 CDS
T07260
Name
(RefSeq) glycerophosphodiester phosphodiesterase GDPD6-like isoform X1
KO
K01126
glycerophosphoryl diester phosphodiesterase [EC:
3.1.4.46
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120690723
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.46 glycerophosphodiester phosphodiesterase
120690723
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Motif
Pfam:
GDPD
LPD1
Motif
Other DBs
NCBI-GeneID:
120690723
NCBI-ProteinID:
XP_039829437
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Position
9N:complement(17338209..17341142)
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AA seq
395 aa
AA seq
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MASSSSLTGHICITVLVLLFGGSKANPAALSHSQLDVNRKKPLQTFRPYNIAHRGSNGEL
PEETAAAYLRAIEEGADFIETDILASKDGHLICFHDVTLDATTDVANRTKFAHRKRTYEV
QGAKVTGWFVVDFTLKELKSLRGKQRFSFRDQRYNGKYQIITFEEYILIALYADRIVGIY
PEIKNPVFINQHVKWSNGKKFEDKFVETLLRYGYKGAYMSEDWLRQPLFIQSFAPTSLIY
VSNMTNSPKVFLIDDTNTPTQDTNQSYYEITSNAYLAFIRNYVIGIGPWKDTIVPTKDNY
LEQPTDLVARAHALNLQVHPYTFRNENSYLHFNFHQDPYAEYEYWLNEIGVDGLFTDFTG
SLHKYQEWTRPYPKKQKKAEALLHEIATMLKNNGY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcgtcatctttgacagggcacatctgtatcactgtccttgtgctgcttttt
gggggatccaaagccaacccagctgcactttcccatagccagctcgatgtaaaccgcaag
aagccactacagacgttcagaccttacaacattgctcacaggggctcaaatggtgaatta
cccgaagaaacagcagcagcctacctgagagctattgaagagggtgcagacttcatcgaa
actgatatactcgcatcaaaggatggacatcttatctgttttcatgatgtaacattggac
gcaacaaccgatgttgcgaaccggacgaagttcgcccacaggaagagaacctatgaagtc
caaggagccaaagttactggatggtttgttgtggacttcactcttaaagagcttaaatca
ctgagggggaaacaacggttcagtttcagggaccaacggtacaatgggaaataccagatt
attacatttgaggagtatatcttgattgcgctttatgcggacaggatagtgggaatatac
cctgagatcaaaaatccagttttcatcaaccagcatgtcaagtggtcgaatggaaagaaa
tttgaggataagttcgtagagacactactgagatatggctataaaggtgcatatatgtct
gaagactggctcaggcagccactcttcattcagtcctttgctccgacttcactcatttat
gtctcaaatatgacaaactctcccaaagtgttcttgattgatgacacgaacactccaact
caagacaccaatcagtcatactatgagataacttcaaatgcctatcttgcattcataaga
aactatgttattggaattggtccatggaaggatacaattgttcctacaaaggacaactat
ttagaacagccgaccgatctcgtcgcacgagcacatgctcttaatcttcaggtgcacccg
tacactttcagaaatgagaattcatacttgcacttcaacttccatcaagacccttatgcc
gaatacgaatattggctcaatgagatcggtgtcgatgggctgttcactgattttactggt
agtttgcacaagtaccaagaatggactaggccatacccaaagaagcagaagaaggcggaa
gcattgttgcatgagatcgcgaccatgttgaagaataatggatactga
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