Panicum virgatum (switchgrass): 120690787
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Entry
120690787 CDS
T07260
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120690787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120690787
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120690787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Mon2_C
Motif
Other DBs
NCBI-GeneID:
120690787
NCBI-ProteinID:
XP_039829531
LinkDB
All DBs
Position
9N:complement(13976036..13982430)
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AA seq
1408 aa
AA seq
DB search
MGRPRTLVAAGIDPIAEEPHHARASPADGPGPDPAALACAISAEASAVLAVMRRGLRHPR
ADDAAAEHPLVASLRALRRLAFSPAASAALPAAALRPFLDAVRSEDAGAAVTSASLAALH
EVMSLTGPALPGAALREVVDAVASCRFEAGAEPAAEEAVLMRMLQALLACLLAPAAAALG
DQHVCTAVNTCFRVVHQAAAKGELLQRFSRHAMHELIRCIFARLPQIGSADGVNSAVKPE
MGGTDMNHPFGIRQMENGNGSYMSETGTSDENSADGSGLVVEPYGVPCMVEIFHFLCSLL
NVVEQIGLDEDLPLFALKLINSAIELGGSSIQKHPKLLSLVQDELFRNLMQFGLSMSPLI
LSIVCSIALNLYHHLRTELKLQLEAFFSCIIIRLAQPRFGATYHQQEVAMEALVDFCRQK
NFMVEMYANLDCDITCRNVFEELANLLSRSTFPINCPLSSMHILALEGLIAVIQGMADRI
GNATSRPELLPVELDEYTPFWTVKCENFSDPRHWVKFVRQRKYVKRRLMIGADHFNRDPK
KGLEFLQGTHLLPEKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLREFAQTFDF
QEMNLDTALRLFLETFRLPGESQKIQRVLEAFSDRYYEQSPQAFANKDTALLLSYSIIML
NTDQHNMQVKKKMTEEDFIKNNRNINGGSDLPREMLSELYHSICRNEIKTTPEQGMGYFE
MSPSRWIDLMRKSKSTSPYIVGDSQPFLDHDMFAVMSGPTIAAIAVVFDHSEHEDVLLTC
VDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEPVTAFGDDLKARLATETLF
TIANRYGDYICTGWRNVLDCILRLHKLGLLPARVASDAADDSELSAEAVQGKAAPSAVPP
SHIPVMGTPRKSSGLMGRFSQLLSLDSEEPRSQPTEQQLAAHQRTLQTIQKCRIDSIFTE
SKFLQPDSLLQLARALIWAAGRPQKVTSSPDDEDTAVFCLELLIAITLNNRDRIVLLWQG
VYEHIANIVQSTVMPCALVEKAIFGLLRICQRLLPYKENLADELLRSLQLVLKLDARVGD
AYSENITQEVARLVKANAAHIKSQMGWRTVVMLLSITARHPDASEVGFEAIMFIMTEGAH
LSLANYGFCIEASRQFAESRVGLADRSIRALDLMADSVRSLALWSQEIKGTGEEGEKRLE
AIREMWLKLLQSLKKLSLDQREEVRNHALASLQRCLTAAEEICLQSATWSHAFDLVIFAL
LDDLLEISQNHSQKDYRNMEGSLVLAMKLVAKVYLQLLPDLFGLSSFCKLWLGVLSRMEK
YIKIKVRGKRSDKLQEVIPDLLKNILLVMKNKGILAKRSTIGGDSLWELTWLHANNISTS
LLPEVFPSQEYEQQSSAGSPRGPNAVEA
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccccaggacgctcgtcgccgccggcatcgaccccatcgccgaggagccccac
cacgcgcgcgcctccccggccgatggcccgggccccgacccggcggcgctcgcctgcgcg
atctccgcggaggccagcgccgtgctcgccgtcatgcgccggggcctccgccacccgcgc
gccgacgacgccgccgccgagcacccgctcgtcgcctccctccgcgcgctccgccgcctc
gccttctcccccgccgcctccgccgccctccccgccgccgcgctgcggcccttcctcgac
gccgtccgctccgaggacgccggcgcagccgtcacctccgcctcgctcgccgcgctccac
gaggtcatgtccctcacggggcccgccctcccgggcgccgcgctcagggaggtcgtcgac
gccgtcgccagctgccgcttcgaggccggggccgagcccgccgccgaggaggccgtgctc
atgaggatgctgcaggcgctactcgcctgcctcctcgcccccgccgccgcggcgctcggg
gatcagcacgtctgcaccgccgtcaacacctgcttccgcgtcgtccaccaggccgccgcc
aagggcgagctcctgcagcggttctcgcgtcacgcgatgcacgagctcatccgctgcatc
ttcgcacgcctcccgcagataggcagtgctgatggagttaacagtgctgtcaaaccagag
atgggtggcacggatatgaatcatccttttggtatcaggcaaatggaaaatggtaatgga
agctacatgtctgagacaggtacctctgatgagaattctgcggatggcagtggtcttgtt
gtggagccttatggagtcccttgcatggtggaaatcttccatttcttgtgctctctcctc
aatgttgttgaacagattggcttagatgaagatcttcctttgtttgctcttaagttgatc
aattcagcaattgagcttggtgggtcttcaattcagaaacatccaaagctgttgtcccta
gtgcaagatgagcttttcagaaacttaatgcagttcgggttgtcaatgagtccactcatc
ctttcaatagtgtgcagtattgcattgaatctgtatcatcacctccggactgagctcaag
ctgcagcttgaggccttcttttcttgtataattataaggcttgcacaaccccgttttgga
gcaacataccatcaacaggaggttgcaatggaagctcttgtagacttctgtcgacagaaa
aattttatggtggagatgtatgccaatcttgactgtgatataacctgtaggaatgttttt
gaggagcttgcaaatcttctgtcgaggagcacttttcctatcaactgccccttgtcttcc
atgcacatacttgctctagaaggcttgattgctgtgattcagggaatggctgatcgtatc
gggaatgcaacctcacgccctgagctcttgcctgtggagctcgatgaatacactcctttc
tggactgttaagtgcgagaacttttctgatcctcggcattgggtgaaatttgtccgtcaa
agaaagtatgtcaaaaggaggctaatgattggtgctgatcacttcaacagggacccaaag
aaaggtctggagtttcttcaaggcactcatttgttgcccgagaagcttgatccccaaagt
gtggcttgttttttccgctacacagctggtttggataagaatcttgttggagatttccta
ggcaatcatgatgagttttgtgttcaggtgcttcgtgagtttgctcagacctttgatttc
caggagatgaacctggatacagctctgcgtctatttttggagactttccggcttcccggt
gaatctcagaagatacagagggttcttgaggccttctcagatagatactacgagcagtct
cctcaggctttcgcaaacaaagacactgctctactattgtcctattccattataatgctg
aacactgatcaacataacatgcaagtgaagaagaaaatgactgaggaggacttcatcaag
aacaacaggaacataaatgggggcagcgacctcccacgtgagatgttatctgagctatac
cattcaatctgccgaaatgagattaagaccacccctgagcagggtatgggatattttgaa
atgtctcccagtcgttggatagatctgatgcggaagtcaaagtctacatccccatatatt
gttggtgactctcagcctttccttgaccatgatatgtttgctgttatgtctggccctacc
attgcagccattgcggtggtatttgatcattcggagcatgaagacgttctattgacctgc
gtggatggctttttaggtgttgcgaagatctctgcatttcatcatcttgaggatgtcttg
gatgatcttgttgtttctttgtgcaaattcaccacactattgaatacctctttggttgag
gaaccagttactgcatttggagatgacctgaaagctagattagcaaccgagacattattt
actatagctaacagatatggtgattacatatgtactggctggaggaacgtgttggattgc
atccttaggctgcataagctagggcttctccctgcccgtgttgctagtgatgccgctgat
gattccgaactttctgctgaagctgtccaaggaaaggctgctcctagtgccgttcctcca
tctcatattccagtgatgggtactcctcggaaatcttctgggcttatgggaagatttagt
cagctgctctctcttgacagtgaagaaccaagatcacaaccaactgagcagcaacttgct
gctcaccaaagaactcttcagacaattcagaaatgtcgcattgatagtatatttacagag
agcaaattcttgcagcctgattcactattgcaacttgccagggctctgatttgggcagca
ggccgaccccaaaaggttaccagttcgccagatgatgaggatacagcagttttctgcttg
gagctgctgattgccataacacttaataaccgagaccgaattgtgctcctctggcaaggt
gtatatgagcatatcgccaacatagttcagtccacagttatgccatgtgctctagtggag
aaagctatttttggactcctgagaatatgccagaggttactaccatacaaggagaacctt
gctgatgaattactgaggtcactccagttagttctgaagctcgatgcacgtgtaggagat
gcatacagcgaaaacatcacacaggaggttgcacgccttgtcaaagcaaatgcagcacat
ataaagtcacagatgggctggagaacagtagtaatgttgctctccattacagctcgccat
cctgatgcttcagaagtaggttttgaggctatcatgtttatcatgacagaaggtgctcac
ctttcactagcaaattatggcttctgcattgaagcatcacggcagtttgctgagtccagg
gttggtttagctgataggtctatccgtgccctggatttgatggctgactctgtcagaagt
cttgccttgtggtcccaagagataaaaggaacaggtgaagaaggtgagaaaaggctggag
gcaatcagagagatgtggctcaaactgctgcaatcactcaaaaaactgagcctggatcag
agagaggaggtgcgaaatcatgcgctagcttcgctccaacggtgcctaacagcagcagaa
gaaatttgcctccagtctgcgacatggtctcatgcctttgatctagtcatatttgccctg
ctcgatgatttgctggagatcagccagaatcactcccagaaggactacagaaacatggaa
ggttcccttgtgcttgccatgaaactagttgcgaaagtatatcttcaactgttgccagac
cttttcggcctaagcagtttttgcaaactgtggctgggagtcctgagccggatggagaag
tacatcaagatcaaggtccgaggcaagcgaagcgacaaactgcaagaggtgatccctgac
ctgctcaagaacattctactcgtgatgaagaacaaggggatccttgcgaagaggagcacg
attgggggtgacagcttgtgggagctgacgtggcttcacgcgaacaacatctccacgagc
ctgctgccagaggttttcccaagtcaggagtatgagcagcagagcagtgccggtagcccg
agagggcccaatgctgtagaggcttag
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