Panicum virgatum (switchgrass): 120690849
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Entry
120690849 CDS
T07260
Name
(RefSeq) COP9 signalosome complex subunit 4-like
KO
K12178
COP9 signalosome complex subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120690849
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
120690849
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GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
CSN4_RPN5_eIF3a
MscS_porin
DUF2408
Motif
Other DBs
NCBI-GeneID:
120690849
NCBI-ProteinID:
XP_039829629
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Position
9N:75578709..75584042
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AA seq
399 aa
AA seq
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MESALASAAAIADQRQKIEQYRHILASVLSSSPPDIAQAKRFLDHMVSDEVPLVVSRQLL
QTFAQDLGKLESDAQKEVAHYALTQIQPRVVSFEEQVVVIREKLAELYESEQQWSKAAQM
LSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDDDAVNAEAFINKASFLVTNSQQEVLNLQ
YKVCYARILDLKRRFLEAALRYYDISQIEQRKIGDEEIDENALEQALSAAVTCTILAGAG
PQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELRPHQKALLQDKSTV
LDRAMIEHNLLSASKLYTNISFDELGTLLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVI
HFDDDTEELQQWDQQISGLCQALNDILDSMSSKGIAIPV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgccctcgcgagcgcggcggcgatcgccgaccagcgccagaagatcgagcag
tatcgccacatcctcgcctccgtcctctcgtcttctccgccagacatcgcccaggccaag
cgcttcctcgaccacatggtgtcggatgaggtgccgctcgtggtgtcgcgccagctgctg
cagacgtttgcgcaggaccttgggaagctggagtctgacgcgcagaaggaggtcgcccac
tacgcgctgacgcagattcaaccgcgcgtggtctccttcgaggagcaggttgtagtgatt
agagagaagcttgcagaactatatgagtctgaacagcagtggtcaaaagcagcgcaaatg
cttagtggtattgatttggactcaggaataaggatgcttgatgacaccaacaaattatcc
aagtgtgtccagattgcacgactctatttagaggatgatgatgcagtgaatgctgaggct
tttatcaacaaggcttcatttttggtcaccaacagtcagcaggaagttctaaacttacag
tacaaggtctgctatgcaaggattttggatctgaaaagaagattcctggaagctgcgctt
cgatattatgatatctctcagattgaacagcgcaagatcggagacgaagagattgatgaa
aatgctctagaacaagctcttagtgctgccgtaacgtgcacaatattggctggtgctggt
ccacaacgctcccgtgttcttgctacgctgtacaaggatgaaagatgctcaaagctgaag
atatacccaatactgcagaaggtctatcttgaaaggattttgaggaaaccagaaatcgat
gcgtttgcagaggagctgaggccacatcaaaaagctttattgcaagacaagtccactgtg
cttgaccgggcaatgattgagcataatctccttagtgccagtaaactttacacaaatatc
agctttgatgagcttgggacattattgggcattgatccaaggaaggctgagaagatagca
tctcggatgatttatgaggatagaatgcggggttcaattgatcaggttgaagctgtgata
cattttgacgatgacaccgaagagctacaacaatgggatcaacagatttctgggctgtgc
caagctctgaacgacatccttgacagcatgtcaagcaaagggatagctattccggtgtga
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