Panicum virgatum (switchgrass): 120690858
Help
Entry
120690858 CDS
T07260
Name
(RefSeq) phospholipase D delta-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120690858
00565 Ether lipid metabolism
120690858
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120690858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120690858
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120690858
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120690858
Endosome - Golgi transport
Others
Others
120690858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
120690858
NCBI-ProteinID:
XP_039829649
LinkDB
All DBs
Position
9N:1321116..1326034
Genome browser
AA seq
850 aa
AA seq
DB search
MGKGSAEPEAAVLLHGDLDIRIVEARCLPNMDIMSERMRRCFSACGGGGGAGGRPDPHDS
LRRGGSMSAKKKIITSDPYVSVCLASATVAQTRVIPNSDNPRWEEHFRVEVAHAAARVEF
HVKDNDVFGAQLIGVASVPVEKIATGALISGWFPVEGRCSSSNSPRPTPELQLSVRYQPI
EDNPLYKDGVGAGPQYSGVPNAYFPLRRGGRVTLYQDAHVANGNLPKIEVDGDRIYEHGK
CWEDICHAIIQAHHLVYMVGWSIYHPVKLVREATKALPSGTPPTLGELLKGKVQEGVRVV
VLLWDDKTSHDKFLLKTDGVMHTHDEETRKFFRHSGVYCVLVPRYASNKLSIFKQQVVGT
LFTHHQKCVILDSQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFKDLDTVFKKDFHNPTF
PVNSHGPRQPWHDLHCKVEGPAAYDILTNFEQRWRKATKWKVNLKKVASWQYDTLIKLNR
MSWIVSPATDEANAHVCDEQDPENWHVQVFRSIDSGSVKGFPKLVQEAESQNLVCAKNLM
IDKSIHSAYVKAIRSAQRFIYIENQYFIGSSFCWPACKNAGADNLIPIELALKIASKIKA
KERFAVYIVIPMWPEGIPTTAPMQQILFWQGQTISMMYKIVADALQSQGLLDAHPQDYLN
FYCLGRRELAGGDISSPKTLCNDSSPLHVAQKFRRFMIYVHSKGMIVDDEFVIIGSANIN
QRSMEGSRDTEIAMGAYQPHYKWAGNTDPPRGQVYGYRMSLWAEHLGTVEECFRRPETEE
CVRQVNDMAEENWQKYVSPDMEETRGHLLGYPVQVGKDGQVGPLPGHECFPDVGGKVLGT
QSSLPNALTT
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagggctcggcggagcccgaagccgccgtgctgctgcacggcgacctggacatc
cgcatcgtggaggccagatgcctccccaacatggacatcatgtcggagcggatgcgccgg
tgcttcagcgcctgcggcggcggcggcggcgccgggggccgccccgatcctcacgacagc
cttcgccggggcggcagcatgtcggccaagaagaagatcatcaccagcgacccctacgtc
tccgtctgcctcgccagcgccacggtcgcgcagacccgcgtgatccccaactccgacaac
ccccggtgggaggagcacttccgcgtcgaggtcgcgcacgcggccgcccgggtcgagttc
cacgtcaaggacaacgacgtcttcggggcgcagctcatcggcgtcgcatccgtgcccgtc
gagaagatcgccaccggggcgctcatcagcggctggttccccgtcgagggccgctgcagc
agcagcaactctccgaggccgacaccggagctgcagctctcagttcgataccagccgatt
gaggacaacccgttgtacaaggacggggtgggcgccggtcctcagtactccggcgtgccg
aacgcctacttccctctccggcgaggaggccgcgtcactctctatcaagatgctcatgtc
gccaatggcaatctgcctaagattgaggtagatggcgataggatttacgagcatggcaaa
tgttgggaggacatttgccacgccattatccaagcacatcatcttgtttatatggtcggc
tggtccatttatcaccctgtcaagcttgtgagggaggctaccaaggcattgcccagtgga
acaccgccaaccctcggggagctcctcaagggaaaggttcaggagggagtccgcgtcgtg
gtgttgctttgggacgacaagacgtcgcatgacaaattccttttgaaaacggatggtgtc
atgcatacacacgatgaggaaactagaaagtttttcaggcattctggagtgtactgtgta
ctggttcctcgttatgccagcaacaaacttagcattttcaagcagcaggttgttggaact
ttatttacacatcatcagaaatgtgtaattcttgattcacaagctgctggaaacaatcgc
aaaataactgctttcattggtggtcttgacttgtgtgacggcagatatgatacacctgaa
cataggcttttcaaagatcttgatactgttttcaagaaggactttcataaccctacattt
ccagttaattcccatggaccaagacaaccttggcatgatttacattgcaaagttgagggt
cctgctgcctatgatatactgacaaactttgaacagcgatggaggaaagctacaaaatgg
aaagttaaccttaagaaagttgcaagttggcagtatgacacactgataaaactaaaccgg
atgtcatggatcgtttcaccagctacagatgaagcaaatgcgcatgtttgtgacgaacag
gacccagaaaactggcatgtacaggttttcaggtcaattgattcaggatccgtaaaggga
tttccaaagcttgttcaggaggcagagtcacagaatcttgtttgtgcaaagaatttaatg
attgacaagagtatacatagtgcttatgtgaaagccatcaggtctgcccagcggtttata
tacattgagaaccagtatttcatcgggtcttcattctgctggcctgcatgtaaaaatgca
ggtgcggataatttaatacccattgagttggccttgaagattgcaagcaagatcaaggca
aaggagcgatttgcagtgtacattgtcataccaatgtggcctgaaggaatcccaaccacg
gctcctatgcagcaaattctcttttggcaggggcaaaccatatcgatgatgtacaagatt
gtggcggatgctcttcagagccagggtctccttgacgcccatccacaggattacctgaat
ttttactgcctcggcagacgtgagctcgctggtggtgacatctcatctccaaagacctta
tgcaatgacagctctcctctgcacgtggcccagaaattccggaggtttatgatctacgtg
cactcgaaagggatgatcgtcgacgacgagttcgtcatcatcggatcagccaacataaac
cagaggtccatggaaggctccagggacaccgagatcgcaatgggcgcgtaccaaccacac
tacaagtgggctggaaacacagaccctcctcgcggccaggtgtacgggtacaggatgtcg
ctatgggcggagcatctgggcacggtggaggagtgcttccggcggccggagacggaggaa
tgcgtccggcaggtgaacgatatggcggaggagaactggcagaagtacgtgtcgccggac
atggaggagacgaggggccacctgttggggtacccggtccaggtgggcaaggacggccag
gtcgggccactgccggggcacgagtgcttcccggacgtcggcggcaaggtcctcggcacg
cagtcgtcgctgcccaatgccctgaccacgtaa
DBGET
integrated database retrieval system
