Panicum virgatum (switchgrass): 120690927
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Entry
120690927 CDS
T07260
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120690927
04120 Ubiquitin mediated proteolysis
120690927
09126 Chromosome
03083 Polycomb repressive complex
120690927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120690927
04121 Ubiquitin system [BR:
pvir04121
]
120690927
03036 Chromosome and associated proteins [BR:
pvir03036
]
120690927
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
120690927
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
120690927
Cul7 complex
120690927
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120690927
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
120690927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
120690927
NCBI-ProteinID:
XP_039829782
LinkDB
All DBs
Position
2K:59907184..59908018
Genome browser
AA seq
173 aa
AA seq
DB search
MASAGSGDETAAAATATATITLISSDGVHFTVLEAAANLSETIQHMIEDGCTDGGIPLPN
VTGSILAKVLEYCNKHAAASAGGEGSSSSSDKEELDKFDKAFVEVDQATLFDLILAANYL
NVKGMLDLTCQTVADMMKGKSVEEIRQTFNIKNDFTPEEEAEIRKENQWAFDD
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggcgggttccggcgacgagacggcggccgcggccacggccacggccacgatc
acgctcatcagctcggacggcgtgcacttcacggtgctggaggcggcggcgaacctgtcc
gagaccatccaacacatgatcgaggacggctgcaccgacggcggcatcccgctccccaac
gtcaccggcagcatcctcgccaaggtcctcgagtactgcaacaagcacgccgccgcgagc
gccggcggcgaaggctcgtcctcgtcgtcggacaaggaggagctggacaagttcgacaag
gcgttcgtggaggtcgaccaggccacgctgttcgacctcatcctggccgccaactacctc
aacgtcaaggggatgctggacctcacctgccagacggtcgccgacatgatgaagggaaag
tcggtggaggagatcaggcagacgttcaacatcaagaacgacttcacgccggaggaggag
gcggagatccgcaaggagaatcagtgggccttcgacgattag
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integrated database retrieval system