Panicum virgatum (switchgrass): 120690940
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Entry
120690940 CDS
T07260
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120690940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120690940
03032 DNA replication proteins [BR:
pvir03032
]
120690940
03036 Chromosome and associated proteins [BR:
pvir03036
]
120690940
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pvir02048
]
120690940
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
120690940
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120690940
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
120690940
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120690940
Prokaryotic defense system [BR:
pvir02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
120690940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
120690940
NCBI-ProteinID:
XP_039829791
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All DBs
Position
9N:47552422..47560883
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AA seq
913 aa
AA seq
DB search
MAPSSPSSAAPTRVSGRKRAAKAEEVRQIQEEEEDAPVASSAKRRRGAAAGKKPKQAKPP
KAGRKKKAEAERTEPVEDDVCAEEPDEEEMALGEAEAEAEAEAEAEAEEQEAPAGSPGKK
RVAQPRKRGAVAAGDHEPEFVGEPVPAAEARTKWPKRYDHRAATNSPDEDEEVKARCHYR
SAKVDNVVYSLDDDVYVKAGENEADYIGRITEFFAGTDGCQYFTCRWFFRPEDTIINSLV
SIDVDGQKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMS
YSVAYSTFANIPSENGASGSETASGISDDADLEMSPRTPGGTATLLDLYSGCGGMSTGLC
LGAALAGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLREWAVLCDKYVNK
DVGLDLAVSEDPEDDDSSLDKDEFVVEKLIGICYGGNGRENGIYFKVQWEGYGPEEDTWE
PINNLSDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNRFRNRNEPLKDEK
NKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSCLVALNYQARLGMMVAGCY
GLPQFRMRVFLWGALSSMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYDETQRPSLKKALL
LGDAISDLPEVENYQPHDVMEYSSSPKTEFQCYIRLSRKDMLDWSFGEETGPDEGKLLDH
QPLRLNDDDYARVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVYLSSGKPLVPDYA
MSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPTQARVLTVRENARLQGFPDYYR
LFGPIKEKYIQVGNAVAVPVARALGYCLGQAFLGELEGSGPLYELPASFTSVTRVAHARA
SPVSTPSGEVIEQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgagctccccgtcgtccgccgcccccacgcgcgtctccgggcggaagcgcgcc
gccaaggccgaggaggtccgccagatccaggaggaggaggaggatgccccggtggcgtcc
tccgccaagcgccgccgcggggcggccgccgggaagaagcccaagcaggccaagccgccc
aaggcggggcggaagaagaaggcggaggccgagaggacggagcccgtggaggacgacgtg
tgcgcggaggagccggacgaggaggagatggccttgggcgaggctgaggctgaggcggag
gcggaggcggaggcggaggccgaggagcaggaggcgcccgcggggtcgccggggaagaag
agggtggcgcagcccaggaagaggggcgccgtcgcggctggggaccacgagccggagttc
gttggcgagcccgtccccgccgccgaggcgcgtaccaagtggcccaagcgttacgaccac
cgcgccgccaccaatagtccggatgaggacgaggaggtcaaggccaggtgtcactaccgg
agtgccaaggtggacaacgtcgtctacagccttgacgacgatgtctacgtcaaggctgga
gaaaatgaggctgattatattggccgcattactgaattttttgcggggactgacggctgt
cagtattttacttgccgttggttcttccgtcctgaggacacgattatcaattccttggtg
tccatagatgttgatggccagaagcatgatcccagacgtgtttttctttctgaggaaaag
aatgacaatgtgctcgattgcatcatctcaaaggtcaagatagtccatgttgatccaaat
atggatccaaaagccaaggctcaactgatagagcattgcgacttgtactatgacatgtct
tactctgttgcgtactccacatttgctaatatcccatcggaaaatggggcatccggcagt
gaaactgcttctggtatttctgatgatgcggatttggagatgtcacctcgtacgccaggg
ggaacagcaaccctgcttgatctgtattctggctgtgggggcatgtccactgggctttgc
ttgggtgcagcacttgcaggcctgaaacttgaaactcgatgggctgttgacctcaatagc
tttgcatgccagagtttgaagtacaatcatccacaaactgaggttcggaatgagaaagcc
gatgaatttcttgctctccttagggaatgggcagttctttgtgacaagtatgtcaacaaa
gatgtgggtttggatttagcagtctcagaggatccagaagatgatgacagctcgcttgat
aaggatgaattcgttgtagagaagcttattgggatatgttatggtggcaatggcagggaa
aatggcatctattttaaggtccaatgggaaggatacggtcctgaagaggatacatgggag
cccattaataacctcagtgactgcccactgaaaattaaagaatttgtacaagaagggtac
aggaggaaaattttgccattgcctggtgatgttgacgtcatttgtggaggcccaccatgc
caagggatcagtgggtttaatcgattcaggaaccgtaatgagccccttaaagatgagaaa
aataaacaaatggttactttcatggatattgtggcatacttgaaacccaagtatgttctc
atggaaaatgtcgtggacatactcaaattcgctgatggctacctaggacgatatgcttta
agctgcctggttgctttgaactaccaagcacggcttggaatgatggtggctggctgttat
ggtctgccacaattccggatgcgtgttttcctttggggtgctctttcttccatggtgctc
ccaaaataccctcttcctacacatgatgttgttgtgcgtggaggggctcctaatgctttt
tctcaaagcattgttgcatatgatgaaactcaaaggccttccttaaaaaaggctttgctt
ctcggtgatgctatttcagacttaccagaggtagagaattatcagcctcatgatgtaatg
gaatattcttcttcccccaagacagaattccagtgctatattcggcttagtcgcaaagac
atgttggattggtcctttggggaggagaccggtccagatgaaggcaaactgttggatcac
cagcccttacggctgaatgatgatgattatgcgcgtgttcagcagattcctgttaagaag
ggagccaatttccgagacctcaagggtgtaagggttggagcaaacaacatagtcgagtgg
gatccagaaattgaacgtgtgtacctgtcgtctgggaaacccctggttccggattatgcg
atgtcattcatcaaggggaggtcacttaagccatttgggcgcctgtggtgggatgagaca
gttcctaccgttgtgaccagagcagagcctcataaccagattatattgcatccgactcag
gcaagagtccttacagtccgggagaatgcaaggttgcagggcttccctgattactaccga
ttgtttggtccgatcaaggaaaagtacattcaagtcggcaacgcagtggctgtccctgtt
gcccgggcactgggctactgtctggggcaagcgttcctgggtgaattagaggggagcggc
ccactgtatgagctgcctgcaagcttcacctctgtgacgcgcgtggcacatgcgagggct
tcccctgtcagcactccttctggggaggtgattgagcagtaa
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