Panicum virgatum (switchgrass): 120690948
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Entry
120690948 CDS
T07260
Name
(RefSeq) CDT1-like protein b isoform X1
KO
K10727
chromatin licensing and DNA replication factor 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120690948
03036 Chromosome and associated proteins [BR:
pvir03036
]
120690948
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
120690948
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120690948
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CDT1
CDT1_C
Motif
Other DBs
NCBI-GeneID:
120690948
NCBI-ProteinID:
XP_039829813
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All DBs
Position
9N:22046948..22051220
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AA seq
570 aa
AA seq
DB search
MSEGNTTQLDLEKGLPQISNDNDSSSPSIIHKMEADTEDSGTKIESPTPEKLESRSKGVV
VSSLARNLLAERYKDRFANQLGEDEDDTDDEDYNDSLSPGVSQPLISGSIELLEKHKDLL
NFFNRMESSIRLLWLRKKMTTFKNIATQVEVLTKRTFSYSHLAQMKHLFPEAIQIKRILL
HDEKSLCMYPDMEITLVMDVVECTSSDQSPSMAICEAFYSKLLNFLDAHHKLRLLCMQGT
DIPEAILPEPFNSRSREKLYLQAPDGHAAEPPLQGTTEDGLSHASHFPQTFQKLMSQKIV
ADATEKTQLLSDPEELSSVRACAYDTEGTNRSPKKQDTHAPVPVNSEISATPSRHLISCC
QESTPKQGTSESSFLAGTPAMQTPKRPLPTSLEKLETTCGHISEPRSTSSARRSLNTSLK
FEGGSLSYHDGMEHEATAKKGVFSEDSFSSNKSVEENDLISFTYKDKTNQIDPVETQEKI
ASLRSTFDIVCDISRSTKNSLITKQELFHYILANNLEIEETGEIEEQLHILEDLAPHWIS
KKVINGGEILYSIVPIPDQSSVRARLVEAV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggggaatactactcagcttgaccttgagaaaggattgcctcagatttctaat
gataatgattcaagtagcccttcaataatacacaagatggaagctgacacagaagattct
ggaaccaaaattgaatcacccactccagagaagcttgaatctagaagcaaaggggttgtt
gtgagttcactagcaaggaatttgcttgcagagaggtacaaagacagatttgcaaaccag
ctgggggaagatgaggatgacacagatgatgaagactataatgacagtctttcacctggt
gttagccaacctctaatttcaggaagcattgaactccttgagaaacacaaggatttgctg
aattttttcaatagaatggaaagttctataaggttgctatggttacgaaagaaaatgact
acatttaagaatattgccacccaggtggaagtactcacaaagaggacattctcatacagt
catttggcccagatgaagcatttatttccagaagcaatccagataaagaggatactctta
catgatgagaaaagcttatgcatgtatcctgatatggaaatcacacttgtcatggatgtt
gtggaatgtacaagttcagatcagtctccatcaatggcaatttgcgaggcgttttactca
aagcttttgaattttttggatgctcatcataagttgcgtttgctgtgtatgcagggtaca
gatattcctgaggcaatcctaccagaaccctttaattcaaggtcaagggagaagttatat
cttcaggcacctgatggacatgctgctgagccacctctgcagggcaccactgaggatgga
ttgtcacatgcttcccacttcccacaaacttttcaaaaactcatgtcacagaaaattgtt
gctgatgcaacagaaaagactcagttgctatctgatccagaagaactgagctctgtgcgt
gcttgtgcttatgatacggaagggacaaacagaagccctaaaaagcaagacacacacgct
ccagttccagtgaactctgaaatttctgctactccaagccgccatttgatctcttgttgt
caagagagtacaccaaaacaagggacctcagaatcatcatttttggctggaacaccagca
atgcagacaccaaaaaggccgttgccgacttcacttgagaaacttgagaccacatgtgga
cacatttctgaaccacgttcaaccagttcagcccgcagatcactgaatacatcgttaaaa
tttgaaggaggaagcctgtcttatcacgatggaatggaacatgaggctacagctaaaaag
ggtgtgttctcagaagattcatttagttccaacaagtcagtagaggaaaatgatcttatc
tcctttacttataaagacaaaacaaatcaaatagacccagtggaaacccaggaaaagata
gcttcgcttcgtagcacatttgacatagtctgtgatatttctcgttctaccaagaattcg
ctaatcactaaacaggaacttttccactacattcttgccaacaacttggagatagaagag
acaggggagatagaagagcagctgcatattttagaggatctggctccccactggatatct
aagaaggtgataaatggaggagaaatactttacagtatcgtacctataccagatcagagt
tcagttcgggcaaggcttgtagaagctgtatga
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