Panicum virgatum (switchgrass): 120691040
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Entry
120691040 CDS
T07260
Name
(RefSeq) ubiquitin-conjugating enzyme 15-like
KO
K10688
ubiquitin-conjugating enzyme E2 W [EC:
2.3.2.23
2.3.2.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120691040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120691040
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
120691040
2.3.2.25 N-terminal E2 ubiquitin-conjugating enzyme
120691040
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120691040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
RWD
UEV
UFC1
Prok-E2_E
Motif
Other DBs
NCBI-GeneID:
120691040
NCBI-ProteinID:
XP_039829933
LinkDB
All DBs
Position
9N:12985903..12988849
Genome browser
AA seq
165 aa
AA seq
DB search
MTSSSPSSSSPSRKALSKIACSRLQKELSEWQVNPPAGFKHRVTDNLQRWVIDVAGAPGT
LYTGETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSV
CISILSMLSSSPAKQRPADNDRYVRNCRNGRSPKETRWWFHDDTV
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctcctccccctcctcctcgtccccttcccggaaggcgctgagcaagatcgcg
tgcagccgcctgcagaaggagctctcggagtggcaggtcaacccgcccgccggcttcaag
cacagggtcaccgacaacctccagaggtgggtcatcgatgtggctggggcaccaggcacc
ctctacactggcgagacgtaccagctgcaggtggacttccccgagcattatcccatggag
gcacctcaggttatatttctgcacccggcaccaatgcatccgcacatctacagcaatggg
cacatctgtttagatatattgtatgattcatggtccccagcaatgacagtcagttctgtc
tgtatcagcatcttgtctatgttgtcaagctcgccagcaaagcaacgcccagccgataat
gatcgctatgtcaggaactgccgcaatggtaggtcaccaaaggagactaggtggtggttc
catgacgacacggtgtga
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