Panicum virgatum (switchgrass): 120691089
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Entry
120691089 CDS
T07260
Name
(RefSeq) fumarate hydratase 1, mitochondrial-like
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00620
Pyruvate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120691089
00620 Pyruvate metabolism
120691089
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
120691089
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
120691089
NCBI-ProteinID:
XP_039829987
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Position
9N:complement(64688140..64694258)
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AA seq
498 aa
AA seq
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MATALRRLAGVPGSPSAAAAAAALLLRPALTRPISTGFREERDTFGPIQVPNDKLWGAQT
QRSLQNFDIGGERERMPVPIIRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAEEVAEGKL
DDHFPLVIWQTGSGTQSNMNANEVIANRAAEILGHKRGEKFVHPNDHVNRSQSSNDTFPT
VMHIAAAVEINSKFIPSLQQLHDSLHSKSVEFNDIIKIGRTHTQDATPLTLGQEFSGYTT
QVKYGIDRINCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAKETNLPFVTAENKFE
ALAAHDAFVESSSAVNTISASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVN
PTQCEALTMVCAQVMGNHVGVTVGGANGHFELNVFKPMIAAGLLRSLRLLGDASVSFEKN
CVRGIQANHKRISQLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKKAALDLGVLT
EDEFHELVVPEKMIGPSD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggctctgcgccgcctcgcgggcgtgcccggctccccgtcggccgccgcggcc
gcggccgcgctgctcctccgcccggcgctgacccgcccgatctccaccggcttccgcgag
gagcgcgacaccttcggccccatccaggtccccaacgacaagctgtggggtgcacagacg
cagaggtcgcttcagaacttcgacattggcggcgagcgcgagcggatgcccgtgcccatc
atccgcgcctttggcgtgctcaaaaagtgcgccgctaaggtgaatatggagtatggactt
gatccaacaataggcaaggcgataatgcaggcagctgaggaggtcgcagagggaaagctg
gatgatcacttcccacttgttatctggcaaactggtagtggcacacaaagcaacatgaat
gccaatgaggtaattgcaaatagggcagctgagattcttggacacaagcgtggtgagaag
tttgtgcaccctaatgaccacgtgaataggtcacaatcctccaatgatacatttcccact
gttatgcatatagcagctgctgtcgagatcaattcaaaatttatcccaagtttgcaacag
ttgcatgattcacttcactcaaagtctgtcgagtttaatgacataatcaaaatcggacgt
acacatacccaagatgccaccccgttaactcttggccaggagttcagtggttacactaca
caggtcaaatatggaattgaccgaattaattgtacattacctcggatgtaccagcttgct
caaggtggaactgcagttggaactggcttgaacactaagaaaggatttgatgtcaaaatt
gccgctgcagtggccaaggaaacaaatctaccctttgtgacagctgagaacaagtttgaa
gctttggcagcacatgatgcttttgttgagagcagtagtgccgtaaacacaatttctgcg
tcccttatgaagatagcaaacgacatacgcttgctgggaagtggccctcgctgtggtctt
ggtgaactaatcctgccagaaaatgagcctgggagcagcatcatgcctggaaaagttaat
ccaacacagtgtgaggctctgaccatggtttgcgctcaggttatgggtaatcatgttggt
gttacagttggtggtgcgaatgggcattttgaactgaatgttttcaagccaatgattgca
gctggattacttcgatcattgagattgttgggagatgcttctgtgtccttcgagaaaaat
tgtgtccggggaattcaagcaaaccataagagaatttcacagcttttgcatgagtctctg
atgttggtgacatctttgaatcctaaaattggctatgacaatgctgcagctgtagctaag
aaagctcacaaagaaggaaccacattaaagaaagctgcactagatcttggagtattaacg
gaagatgaattccatgagcttgtcgtcccagagaaaatgattggcccttctgattga
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