Panicum virgatum (switchgrass): 120691124
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Entry
120691124 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA thiolase 2, peroxisomal-like
KO
K07513
acetyl-CoA acyltransferase 1 [EC:
2.3.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00280
Valine, leucine and isoleucine degradation
pvir00592
alpha-Linolenic acid metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120691124
00592 alpha-Linolenic acid metabolism
120691124
01040 Biosynthesis of unsaturated fatty acids
120691124
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120691124
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120691124
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
120691124
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Motif
Pfam:
Thiolase_N
Thiolase_C
BSH_YknX
Thiolase_C_1
ACP_syn_III_C
ketoacyl-synt
Motif
Other DBs
NCBI-GeneID:
120691124
NCBI-ProteinID:
XP_039830035
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Position
9N:complement(25434895..25438598)
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AA seq
462 aa
AA seq
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MEKAIDRQRVLLRHLDPAAAAPGPAQPAISASACAAGDSAAYHRRAAFADDVVIVAAYRT
AICKAKRGGFKDTFAEDLLVPVFKALVDKTKLNPSEVGDIVVGTVLAPGSQRAIECRMAA
LYAGIPDTVPLKTVNRQCSSGLQAVADVAAAIKAGLYDIGIAAGLESMTVNKVSLDGQVN
PKVELFSQARDCLLPMGLTSENVAHRFGITRLEQDQAAVESHRKAAAAAAAGKFKEEIVP
VHTKIVDPKNGEEKEIIVSADDGIRAGTSLAVLSKLKPAFSKDGSTTAGNASQVSDGAGA
VLLMRRDVAMKKGLPIIGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLQINDIDLFEI
NEAFASQYVYCCKKLELDPTKVNVNGGAIALGHPLGATGARCVSTLLNEMKRRGKDCRFG
VISMCIGSGMGAAAVFERGDGVDELTNARGIPSHNWLSKDAM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggccatcgacaggcagcgggtcctgctgcggcacctcgaccccgcggcggcg
gcgccgggccccgcccagcccgccatctccgcgagcgcgtgcgcggcgggggacagcgcg
gcgtaccaccggagggcggccttcgccgacgacgtcgtcatcgtcgctgcatacaggacg
gcgatttgcaaggccaagagagggggtttcaaggatacgttcgctgaggacctattggtt
cctgtcttcaaggctttagtagataaaacaaagctgaaccctagcgaagttggcgacatc
gttgttggtactgtcttagctcctgggtcccagagggcaatcgaatgcagaatggcagca
ctgtatgctggtattcctgacactgttcctctgaagactgtaaacaggcaatgctcttct
ggccttcaggcagttgcagatgttgctgctgctattaaagcagggctgtatgatattggt
attgctgctggcctcgagtccatgacagtgaacaaagttagtcttgacggtcaagtgaat
cccaaagttgagctgttttctcaagcacgtgattgccttctcccaatgggcctcacatct
gagaatgttgcacaccgattcggcataacacgactggaacaagatcaagctgctgttgag
tctcacagaaaggctgctgcagctgcagctgctggtaaattcaaggaagaaattgtgcct
gttcatactaagattgtcgatccaaaaaatggtgaggaaaaggagatcattgtctcagca
gatgatggaatcagagctggtacttcgctggcagtcctgtcaaaactcaaaccagcattt
tcaaaggatggcagcactactgctgggaatgctagccaagtgagtgatggcgctggggct
gtcttgctaatgagacgtgatgtcgctatgaaaaagggccttccaattattggcgtcttt
aggagctttgcggcagttggagttgatccagctgtaatgggtattgggccagctgttgca
atccctgcagctgtgaaagctgccggactacaaatcaatgatattgacctttttgaaatc
aatgaggcttttgcatctcagtatgtgtactgctgcaaaaagttggaacttgatcctaca
aaagtcaacgtcaacggaggtgcaattgctcttgggcatccattgggtgctacaggtgct
cgatgtgtcagtactcttctcaatgagatgaaacgtcgtggcaaggattgccgttttgga
gtgatttctatgtgcataggttctgggatgggtgctgctgctgtattcgagcggggagat
ggtgtggatgagctcactaatgctcgggggatcccgtcccataattggctttccaaggac
gccatgtaa
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