Panicum virgatum (switchgrass): 120691137
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Entry
120691137 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120691137 isoform X1
KO
K00599
tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120691137
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120691137
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SSDB
Ortholog
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GFIT
Motif
Pfam:
Methyltransf_12
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_16
Methyltransf_11
MTS
TehB
Methyltransf_2
Ubie_methyltran
PrmA
CMAS
Methyltransf_4
Cons_hypoth95
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
120691137
NCBI-ProteinID:
XP_039830056
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All DBs
Position
9N:79513609..79518713
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AA seq
557 aa
AA seq
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MAAGEQQPQLGATRVSSSSSTGSGRLVTPFWKEKYERDARRYWDIFYKRHEDKFFKDRHY
LDKEWGKYFEGQDGEKMVLLEVGCGAGNTIFPLLSTFPDIFVHACDFSPRAVDLVKKHKD
FRPDRLNAFVCDITSEQLTENMEPSSADIVTMIFVLSAVAPDKMPLVLQNVRSVLKHGGR
VLFRDYAFGDLAQERLMSKGQQISENFYVRGDGTRAYYFSNEYLVDLFSKCGFTLEEICV
HNKQVENRSLDLVMNRNWIQATFTLDSSDSQSLNGQRDLHVCEGKEDKLVADSSKNKSSS
EEIDLSEDFGNMFGTSHNLDEVQIIGIKAKGHDFKIKMLTKEYQHTCKLTGLMLWESAQL
MCSLLAENPLIVAGKRVLELGCGSAGICSLVAASSAQFVVATDGDAESLNLLKQNISSNL
EPNLLDRIMIRKLFWGNKDDLREVRELSGNDTGFDCIIGTDVTYNPDAVLPLFKTARELI
SDKANEDARAAFILSYIQRRVDENSILSNAMAQGFRLVDKWINGVHDSNGIIGSWFSGND
VCSAYRNTTLSILYFEL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgggagagcagcagccgcaactcggcgccacgcgggtctcctcgtcgtcctcc
accggctcggggaggctcgtcactcccttctggaaagagaagtacgagagggatgcgagg
aggtactgggacatcttctacaagcgccacgaggacaagttcttcaaagatcgacactac
ctggataaagaatgggggaaatactttgagggacaagatggagagaagatggtgctgcta
gaggttggttgtggagctggaaacacgatatttccattgctgtccacatttcctgatata
tttgttcatgcctgtgatttttctccacgagctgttgacttggtgaagaagcacaaggac
ttcagacctgaccggttaaatgcatttgtttgtgatattacatcagaacaactaactgag
aacatggaaccttcttctgctgatattgtaacaatgatatttgtgctctctgcagttgca
ccagataaaatgcctttagttctgcagaatgttagaagtgtcctaaagcatggtggccgt
gttctctttcgggactatgcctttggagaccttgcacaggaaaggcttatgtcaaaaggc
cagcaaataagtgagaacttctatgtcagaggcgatggtacgcgtgcgtattacttttca
aatgaatatctggtcgacttattctcaaaatgtggatttactcttgaggaaatatgtgtg
cacaacaagcaggttgagaaccgttcacttgacttggtgatgaacaggaattggatccaa
gctacatttaccctcgattcgtctgattctcaaagtctgaatggtcaacgtgacctccat
gtgtgtgaaggaaaagaggataagctagttgctgactcttctaagaataaaagtagtagt
gaagaaattgatctttccgaggatttcggcaacatgtttgggacatcacacaaccttgat
gaggtacaaatcattggaatcaaagcaaaaggtcacgacttcaaaataaaaatgctcaca
aaggaataccagcacacctgcaaattaactggcttaatgctttgggaatcagctcaactc
atgtgcagtctgttagcagagaatcctctcattgttgcaggcaaaagggtcctggagctg
ggctgtggctcggctggcatctgctcattggttgctgcaagttccgctcagtttgttgta
gctacagatggggatgcagaatcactgaacctcctcaaacagaatatctcttcaaatttg
gagcctaatttgctcgacagaattatgattaggaagttattttggggtaacaaagatgat
ttgagggaggtgagagagctttctggcaatgacacaggttttgactgcataataggcacc
gacgtcacctacaatcctgatgctgtacttcctctcttcaagactgccagagaactcatt
tctgacaaagctaacgaggatgcaagggcagcttttattcttagctacattcagcgccgt
gttgatgagaattctatcctttctaatgcaatggcccagggtttcaggcttgtggacaaa
tggataaatggagttcatgacagtaatggtattattggttcttggttctctggtaatgat
gtttgtagcgcttaccgaaacacgacactttcgatattgtattttgaattgtga
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