Panicum virgatum (switchgrass): 120691198
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Entry
120691198 CDS
T07260
Name
(RefSeq) protein CDC73 homolog
KO
K15175
parafibromin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120691198
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120691198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_C
CDC73_N
Motif
Other DBs
NCBI-GeneID:
120691198
NCBI-ProteinID:
XP_039830148
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All DBs
Position
9N:14037596..14041021
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AA seq
379 aa
AA seq
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MDPLSVLRDYAARNELDKIIFSGDDILFGSDYTFPANTPTAFTSKQSNRPYPLSAAVFLA
QHHDLKHTDFIQAARLRRIPPVSLPDRKTFLDFLRFGHNSLPTADPLLPSAFAPPETHLH
PPSPPPEDPAAADEATTGAQIRALERPFKDRNALLDARGRDFLAVFQAALRRQDEQRKAG
GKDAAPSSRTDSGAGAAALAKPKVVDRALGDGVVPIILVPSASQTLITIYNVKEFLEDGV
FVPSEERMRATKGGKPESVTVQKKLIRAERAGAAGGAVSFEVRDKPASLKSDDWGRVVGV
FVLGKEWQFKDWPFKDHVEIFNRVIGFYVRFEDDSVEAAKVVKQWNVKIISISKNKRHQD
RTAALEVWERLEEFMRARP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatcctctctccgtgctccgcgactacgccgcccgcaacgagctggacaagatcatc
ttctccggcgacgacatcctcttcggctccgactacaccttcccggccaacacccccacc
gccttcacctccaagcagtccaaccgcccctacccgctctccgccgccgtcttcctcgcg
cagcaccacgacctcaagcacaccgacttcatccaggccgcgcgcctccgccgcatcccg
cccgtctccctccccgaccgcaagaccttcctcgacttcctccgcttcggccacaactcg
ctccccaccgccgacccgctcctcccctccgccttcgcgccgccggagacccacctccac
ccgccctcgccgccgcccgaggaccccgccgccgccgacgaggccaccacgggggcgcaa
atccgcgcgctcgagcgcccattcaaggaccgcaacgcgctcctcgacgcccgcggccgc
gacttcctcgccgtcttccaggccgccctgcgccgccaggacgagcaacgcaaggccggc
ggcaaggacgcggcgccatcctcccgcaccgactccggcgccggcgcggccgccctcgcc
aagcccaaggtcgtggacagggccctgggtgacggcgtcgtgcccatcatcctcgtgccc
agcgcctcgcagacgctgattacgatctacaacgtcaaggagttcctcgaggacggggtg
ttcgtgcccagcgaggagaggatgcgggcgaccaagggaggcaagccggagagcgtcacg
gtgcagaagaagctgattcgtgcggagagggcgggcgcggctgggggtgccgtctcattc
gaggtaagggacaagccggcttcgctcaagtcggacgattgggggcgggtggtgggcgtg
tttgtgctcggcaaggagtggcagttcaaggactggcccttcaaggaccatgtagagatc
ttcaacagagttattggtttctatgtgcgcttcgaagatgatagtgtggaggcagccaag
gtggtcaaacagtggaatgtgaaaatcatatctataagtaaaaataaaaggcatcaagac
aggacagctgctcttgaggtatgggagcgcttggaggaatttatgcgggcacgcccataa
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