Panicum virgatum (switchgrass): 120691258
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Entry
120691258 CDS
T07260
Name
(RefSeq) myb-like protein AA
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120691258
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120691258
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
USP8_interact
Myb_DNA-bind_7
TFIIA
Motif
Other DBs
NCBI-GeneID:
120691258
NCBI-ProteinID:
XP_039830230
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Position
2K:complement(60365471..60367371)
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AA seq
370 aa
AA seq
DB search
MGRAPCCEKSGLKKGPWTPEEDEKLIAYIKKHGQGNWRTLPKNAGLARCGKSCRLRWTNY
LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
IDPVTHAPRLDVLDLSALLKPAAAYYPTQADLDTLRAFEPLANYPDLLRLAASTLLAGSP
AIGDQQQQQQQLLPWLLQAQMAQAAAMVAPPPQQQAEHNQFMQQQQAAVAACQMPDLVHA
SPTSVAQQLAAAAQQQQHQHQPQDMAAAACHSMQPPTGYVVDSQQLDVPALMQMVQQPDA
SNLQQWSSTVTSSNNNNVGSGVSTPSSSPVAGLNSTATTTTYGGASASSSDAAALFNLQL
SDLLDVSDYM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgcgccgtgctgcgagaagagcgggctgaagaaggggccgtggacgccggag
gaggacgagaagctcatcgcctacatcaagaagcacggccagggcaactggcgcaccctc
cccaagaatgccgggctcgcgcggtgcgggaagagctgccggctgcggtggaccaactac
ctgaggccggacatcaagcgcggccgcttctccttcgaggaggaggagaccatcatccag
ctccacagcatcctcggcaacaagtggtcagcgatcgcggcgcggctgcccgggcggacg
gacaacgagatcaagaactactggaacacgcacatccgcaagcgcctgctccgcatgggc
attgaccccgtcacccacgcgccgcgcctcgacgtcctcgacctctccgcgctcctcaag
cccgccgccgcctactaccccacgcaggccgaccttgacacgctccgcgccttcgagccg
ctcgccaactacccggacctgctccgcctcgccgcctccaccctgctcgcgggctcgccc
gcgatcggcgaccagcagcagcagcagcagcagcttctgccttggctgctgcaggcgcag
atggcgcaggcggccgccatggtggcgccgccgccgcagcagcaggccgagcataatcag
ttcatgcagcagcagcaggccgccgtagccgcgtgccaaatgccggacctggtccacgcg
agcccgacctcggtggcccagcagctggcggcagccgcgcagcagcaacagcaccagcac
cagccccaggacatggccgcggcggcctgccacagcatgcagccgcccaccggctacgtc
gtcgacagccagcagctggacgtcccggcgctgatgcagatggtccagcagcccgacgcg
tcgaacctccagcagtggagcagcacggtgacgagcagcaacaacaacaacgtcggctcc
ggcgtgtccacaccgtcgtccagccccgtcgccgggttgaattccaccgccacgacgacg
acgtacggcggcgcgagcgcgagcagcagcgacgccgccgcgctgttcaacttgcagctg
tcggacctcctcgatgtcagcgactacatgtaa
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