Panicum virgatum (switchgrass): 120691265
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Entry
120691265 CDS
T07260
Name
(RefSeq) putative PAP-specific phosphatase, mitochondrial isoform X1
KO
K01082
3'(2'), 5'-bisphosphate nucleotidase [EC:
3.1.3.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00920
Sulfur metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
120691265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120691265
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
120691265
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
120691265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Inositol_P
Motif
Other DBs
NCBI-GeneID:
120691265
NCBI-ProteinID:
XP_039830241
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All DBs
Position
2K:complement(60377024..60381490)
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AA seq
432 aa
AA seq
DB search
MPLLHLSLPPHRLLVAGRGGLYFPPVPRHTCLSVRAAAGDAAVSVAAGAYDLPFPPERAS
HHRELAAAAAAVERACRLCVDVKRSLFSGGKSILEKNDQTPVTIADFEVQALVSLELQRL
FPSIPLVAEEDSASLRSSNTDDNSSDVLVESIFSGVADKVSNSSSLLTQDDVLRAIDRGG
KDAVSFDSNPATYWVLDPIDGTKGFLRGDDALYVVGLALVVNGKVTIGVMGCPNWTNDTI
HNEKDGSAAACNDRGILMVSHLGCGTWSRRLSSEIGQSTTAQDIWKRCFVDTCSVVHIAR
YCIPNSQTWDMIPLSVLFNSTTGESDPRNENEILLLSVFCGSLCKYLTVASGRASVFVLR
ARPTTQIKSWDHAVGVICVQEAGGQISDWSGKPLDLAADLTSRRIIYPSGGVLVTNGALH
DKLVEMISANYK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctccacctctcgctcccgccgcaccgcctcctcgtcgccggccgcggcggg
ctgtacttcccgccggttccccgtcacacctgcctatccgtcagggcggcggctggggat
gcagccgtgtctgtcgccgcgggggcttacgatctccccttccctccggagcgcgcctcc
caccaccgcgagctcgccgcggccgccgccgccgtggagcgcgcctgccgcctatgcgtt
gacgtgaagaggtcgctattttcaggtgggaagagtattcttgaaaagaatgaccaaact
cctgtcacaattgcggatttcgaggtgcaggcccttgttagtttggaactccagagattg
ttcccatcaatacctctggtggcagaagaggactcggcatctctaaggtcatccaacact
gatgataatagtagtgatgtacttgttgagtcaatttttagtggagttgcagacaaagtg
agcaacagtagttcacttttaactcaagatgatgtgctgagagcaattgatagagggggc
aaggatgctgtctcatttgattcaaaccctgctacttattgggtacttgatccaattgat
ggcaccaaaggtttcttgagaggcgatgatgctctatatgtggtgggcctggctcttgtg
gtgaatgggaaggtaacaattggagtgatgggatgtccgaattggaccaatgacaccata
cacaacgagaaagatggcagtgctgctgcatgtaatgaccgggggattcttatggtatct
catctaggctgtggtacatggtctaggcgcctgtcttctgagattggccagtccactaca
gcacaggatatttggaaaagatgctttgttgacacatgttcagttgttcacatagcacgc
tattgcattccgaatagccaaacatgggatatgataccattatctgttctcttcaattca
acgacgggtgaatctgatcctagaaatgagaatgaaattcttctcctatcggttttctgt
ggcagcttgtgcaagtatctaactgtagcttctgggagagcctccgtttttgtcctccga
gcacggccgacaactcagatcaagtcttgggatcatgctgttggggtaatttgcgtgcag
gaagctggcggccagatcagtgactggagtggaaaaccgttggatcttgcagctgaccta
acttctcgcagaatcatctacccttcgggcggcgttcttgtgacaaatggtgctctgcat
gacaagcttgtggaaatgatctcagctaattacaagtag
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