KEGG   Panicum virgatum (switchgrass): 120691279
Entry
120691279         CDS       T07260                                 
Name
(RefSeq) lariat debranching enzyme-like
  KO
K18328  lariat debranching enzyme [EC:3.1.-.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120691279
   03009 Ribosome biogenesis [BR:pvir03009]
    120691279
Spliceosome [BR:pvir03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    120691279
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  90S particles
   RNase
    120691279
SSDB
Motif
Pfam: DBR1 Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 120691279
NCBI-ProteinID: XP_039830253
LinkDB
Position
9N:complement(9775759..9779772)
AA seq 411 aa
MKIAVEGCMHGELDIVYDTLRKLEEAEGIKIDLLLCCGDFQAVRNTDDLRCVNVPLKYRT
MNSFWKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFSGVVKFGNIRI
GGLSGIHKQHNYHSGHYERPPYNEQTIRSVYHVRHYDVLKLMHLKEPLDIFLSHDWPLGI
TEYGNWQKLIRAKKHFEEEVNSRTLGSKPAAELLNKLKPPYWFSAHLHCWFPAIIQHGEN
GPTTKFLALDKCLPGRNFLQVIDIPSNPGPHEIQYDEEWLAITRRFNSIFPLTRRRFTMR
DEQLDTQDDREWIRNKLNTRGFKPFDFVQTAPSFNPSNPVSNSSITRSCRNLQTESFLQL
LELPYLLDSSNSEGVSFVNEVDRNESSSQPGNTLDDEDIELPDEDEDAIDE
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaagatcgcggtggagggttgcatgcatggggagctggacatcgtctacgacacgctt
cgcaagctcgaggaggccgagggaatcaagattgacctcctcctctgctgtggcgacttc
caggctgttaggaatacagatgatttacggtgtgttaacgtcccactaaagtatcgtacc
atgaactcattttggaagtactactcaggacaagcagttgctccatacccaaccatcttt
atcggtggaaatcatgaagcatctaattatctgtgggaattgtactatggaggatgggca
gcacctaacatatactttttagggttttctggtgttgttaagtttggaaacatccgaatt
ggtggactgtcaggaatacataagcaacacaattatcactcaggacactatgagaggcct
ccatacaatgaacagactatacgatctgtgtaccatgttaggcattacgatgttctcaag
ctcatgcatttgaaggagccactagatatattcttatcacatgattggcctctgggcatt
actgagtatgggaactggcagaagctcattcgcgcgaagaagcactttgaagaagaggtt
aacagtagaacgctaggtagcaaacctgcagctgaattactgaacaaactaaaaccgccc
tactggttttcagcacatttgcattgctggttcccggctatcatccaacatggagagaat
ggacctacaacgaagtttcttgcccttgataagtgccttcctggccggaattttttgcag
gttatagacattccatccaatccaggaccacatgaaatccagtacgatgaagaatggctt
gccataacaagaagattcaatagcattttccccttaactcgaaggcgatttactatgcgg
gatgagcagcttgacactcaagatgaccgagaatggattcggaacaagttgaatactaga
gggtttaagccgtttgactttgtccagactgcaccatctttcaatccttccaatccagtc
tccaattcctccataacaagaagttgcaggaatctacaaactgagtctttcctccagctt
ctggaactcccatatctgctggactcatctaactctgagggggtgtcttttgttaatgag
gtcgatagaaacgagtcaagctctcagccaggaaacacgcttgatgatgaagatatagaa
ctaccggatgaagatgaagatgccatagatgaatag

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