Panicum virgatum (switchgrass): 120691313
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Entry
120691313 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120691313
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120691313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
120691313
NCBI-ProteinID:
XP_039830290
LinkDB
All DBs
Position
9N:complement(49785570..49790451)
Genome browser
AA seq
1156 aa
AA seq
DB search
MASKGILKNSGSSRMPAQGAGKPPAAPTSAPTVVFGRRTDSGRFISYSRDDLDSEISSVD
FQDYHVHIPMTPDNQPMEDEDGAAAARAEECYVSGSLFTGGFNSVTRAHVMDKQDGAGAG
RRGGAKGAGACMVEGCDARAMRDARGDVVLPCECDFRICVDCFTDAVKAGGAACPGCKEP
YKNTEWEDLAGGAEVTRALSLPRGPAGANGHKMERRLSLVKQTNVNQSGEFDHNRWLFET
KGTYGYGNAIWPQDGVDDDADGGAPAGPGHPKELLTKPWRPLTRKLRVPAAVISPYRLLV
LIRLVALAFFLMWRIKHQNQDAIWLWGMSIVCELWFAFSWVLDQLPKLCPINRATDLSVL
KEKFEMPTPNNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVEKLACYVS
DDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPDSYFNLKRDPFKNKVKPDFVKDRR
RIKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMKLQREKMKAGGDEPFEPVKIPKAT
WMADGTHWPGTWLQPSQDHARGDHAGIIQVMLKPPSDMPMYGNINEKSPLDFAGVDTRLP
MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKALREGMCFM
MDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDINMRALDGLQGPVYVGTGCLFRRIA
LYGFDPPRSKDHSPGFCSCCLPRRRKASASNANPEETMALRMNDFDGDSMNLATFPKKFG
NSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPREMLDASIVAEAISVISCWYEEK
TEWGIRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTQRDAFRGTAPINLTDRLHQVLRWA
TGSVEIFFSRNNALLASSKMKVLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQ
TLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLK
VIAGIEISFTLTSKQVGDDVEDEFAELYIVKWTSLMIPPLTIIMINLVAIAVGFSRTIYS
TIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVSITISLLWIAIKP
PSQAPNSQFGGSFSFP
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggcatcctcaagaacagcggctccagccgcatgccggcgcagggcgcc
ggcaagccgcccgccgcgcccacatcggcgccgacggtcgtcttcggccgccggaccgac
tccgggcgcttcatcagctactcgcgcgacgacctggactcggagatcagcagcgtcgac
ttccaggactaccacgtccacatccccatgacgcccgacaaccagcccatggaggacgag
gacggcgccgccgccgccagggccgaggagtgctacgtctccggctcgctcttcaccggc
ggcttcaacagcgtcacccgcgcgcacgtcatggacaagcaggacggcgccggcgccggc
cgccgcggcggcgccaagggcgccggcgcctgcatggtcgagggctgcgacgccagggcc
atgcgcgacgcccgcggcgacgtcgtgctcccctgcgagtgcgacttcaggatctgcgtc
gactgcttcacggacgccgtcaaggccggcggcgccgcctgcccgggctgcaaggagccg
tacaagaacaccgagtgggaggacctcgccggcggggccgaggtcacgagggcgctctcg
ctgccccgcgggcccgccggcgccaacggccacaagatggagaggcgcctgtcgctggtc
aagcagaccaacgtcaaccagtccggcgagttcgatcacaaccgctggctcttcgagacc
aagggcacctatggctatggcaacgccatctggccccaggacggcgtggatgacgacgcc
gatggcggcgccccagctggacctgggcaccccaaggagctcttgaccaaaccatggcgg
ccgctcacccgcaaactgagggttccagctgccgtcatcagtccttacaggctcctcgtc
ttaatccgattggtcgcgctggccttcttcctcatgtggcgtatcaagcaccaaaaccag
gacgccatttggctttggggaatgtcaattgtctgtgagctctggtttgcgttctcatgg
gtactggaccagctcccaaagttgtgccctatcaaccgcgcaacagacctctctgtgctg
aaggagaaatttgagatgcccacacctaacaatccaacaggcaaatccgatctccctgga
attgacatctttgtgtcaactgctgatccagagaaggagccagtcttggtcactgcaaac
acaattctctccatcctcgcagctgactaccctgtagaaaagcttgcatgttacgtgtca
gatgatggaggggcattgctcaccttcgaagcgatggctgaagcagcgagctttgccaat
ctctgggtgccattctgcaggaagcatgacatagaacccaggaaccctgacagctatttc
aacctgaagagagatcccttcaagaacaaggtgaagccggactttgtcaaggacagaagg
cggatcaagcgtgaatatgatgagttcaaggtccgtgttaatggcttgccagatgccatc
cgccgtcgctcagatgcgtaccatgcccgtgaagagatccaggcaatgaaacttcagagg
gaaaagatgaaggctggaggtgatgaaccgtttgagccggtgaagattcccaaggcaaca
tggatggctgatggcactcactggcctggtacctggctccaaccctcacaggatcatgcc
cgaggtgatcacgcaggaatcatacaggttatgctgaaaccaccaagtgacatgcccatg
tatgggaacatcaatgaaaagtcacctcttgacttcgcaggagtggatacacggcttcca
atgctggtgtatgtctcaagagagaagcgcccaggatacgatcacaataagaaagcaggt
gctatgaatgcactggtccgtgcttcagcaatcatgtccaatggtccattcattcttaat
ctggactgtgatcactatgtctacaactcaaaggccttaagggaggggatgtgcttcatg
atggaccgtggtggtgaccgcctctgctatgtgcagttccctcagcggtttgaaggtatt
gacccttctgatcgttatgccaaccacaatacagttttctttgatatcaacatgcgtgca
cttgatggtctgcaaggaccagtgtatgttggtactggatgcctcttccgtcgaattgct
ctttatggctttgatccacctcgttccaaggatcacagcccaggattctgcagttgctgt
ctcccacgccgccgtaaggcatcagcttccaatgctaaccctgaggaaacaatggctctt
cgcatgaatgattttgatggtgatagcatgaacctcgcaacattccccaagaagtttgga
aattcaagctttctgattgactccattccagtagcggaattccagggaagacccttggct
gaccatccatctgtcaagaatgggcgtccacctggtgctctaacaatccctcgtgaaatg
ctagatgcatccatcgtagcagaagcaatcagtgtgatctcatgttggtacgaggagaag
acagaatggggtataagggtggggtggatctatgggtctgtcactgaggatgttgtgaca
gggtaccgcatgcataatcgtggatggaagtcggtttactgtgtcacacagcgtgatgcc
ttccgtggcactgctcctatcaaccttactgaccgccttcatcaggtgcttcgatgggcc
actggttctgttgaaatcttcttctcccgtaacaatgcattgttagccagctccaagatg
aaggttcttcaaaggattgcttacctcaatgttggtatatatcccttcacatccatcttc
ctcattgtttactgcttccttccagcactttccctcttctcagggcagttcattgtgcaa
acactcaatgtcaccttcctgacatacctacttatcatcactatcactctttgcctcctg
gccatgttggaaatcaagtggtctggcattgcacttgaggagtggtggcgaaacgaacaa
ttctggctcattggtggaactagtgcacacctggctgctgtgctgcaaggtctcctaaaa
gtgattgcagggattgaaatctcatttacactcacttcaaagcaagtgggtgatgatgta
gaggatgaatttgcagaactctacatagtaaaatggacatcattaatgataccacccctc
accatcatcatgatcaaccttgttgccattgctgttggcttcagccgaacaatttacagc
acaatcccacaatggagcaagcttcttggtggagtgtttttcagcttctgggtgcttgct
catttatatccatttgcaaaggggctcatgggcaggagaggaaggacacccactattgtg
tatgtctggtctggacttgtttccatcaccatctcattgctctggattgcgatcaagcct
ccatcacaagctcccaactcgcagtttggcgggtcgttttctttcccctga
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