Panicum virgatum (switchgrass): 120691359
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Entry
120691359 CDS
T07260
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
pvir04141
Protein processing in endoplasmic reticulum
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120691359
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120691359
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120691359
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120691359
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120691359
03009 Ribosome biogenesis [BR:
pvir03009
]
120691359
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120691359
04131 Membrane trafficking [BR:
pvir04131
]
120691359
03051 Proteasome [BR:
pvir03051
]
120691359
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120691359
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120691359
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120691359
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Prp19 complex
120691359
Complex C
Prp19-CDC5 complex
120691359
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120691359
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120691359
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120691359
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120691359
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120691359
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120691359
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120691359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
120691359
NCBI-ProteinID:
XP_039830337
LinkDB
All DBs
Position
9N:69387231..69390038
Genome browser
AA seq
656 aa
AA seq
DB search
MASKNGGGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIG
DAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQADMKMWPFKVVPGPADKPMIVVTYKGEE
KKFSAEEISSMVLTKMKEIAEAYLSTTIKNAVITVPAYFNDSQRQATKDAGVIAGLNVMR
IINEPTAAAIAYGLDKKAASSGEKNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLG
GEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE
GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSQIHDVVLVGGSTRIPKVQQL
LQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNQKVQDLLLLDVTPLSLGLETAGGV
MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELTGIPPAPR
GVPQINVTFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIERMVQEAEKYKSED
EEVKRKVEARNALENYAYNMRNTVRDEKIASKLPAEDRKKIEDTIEDAIKWLDGNQLAEA
EEFEDKMKELESICNPIISKMYQGAGGAAGMDEDAPSGGAGTGGGSGAGPKIEEVD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaagaacggcggcggcaagggggagggcccggcgatcggcatcgacctcggc
accacctactcttgcgtcggggtgtggcagcatgaccgggtggagatcatcgccaacgac
cagggcaaccgcaccacgccctcgtacgtggccttcaccgacaccgagaggctcatcggc
gacgccgccaagaaccaggtcgccatgaaccccaccaacaccgtcttcgatgccaagcgg
ctcatcggcaggcgcttctcggacccgtccgtgcaggcggacatgaagatgtggccgttc
aaggtcgtccccggccccgccgacaagcccatgatcgtggtcacctacaagggcgaggag
aagaagttctcggccgaggagatctcctccatggtgctcaccaaaatgaaggagatcgcc
gaggcctacctcagcaccaccatcaagaacgccgtcatcaccgtgccggcctacttcaac
gactcccagcgccaggccaccaaggacgccggcgtcatcgcgggcctcaacgtcatgcgc
atcatcaacgagcccacggccgccgccatcgcctacgggttggacaagaaggccgccagc
tccggcgagaagaacgtgctcatcttcgacctcggcggcggtaccttcgatgtctccatc
ctcaccatcgaggagggcatcttcgaggtcaaggccacggccggcgacacccacctggga
ggcgaggacttcgacaaccgcctcgtcaaccacttcgtgcaggagttcaagaggaagcac
aagaaggacatcagcggcaacccgagggcgctccggcgtctgaggacggcctgcgagagg
gccaagaggacgctctcctccaccgcccagaccaccatcgagatcgactccctctacgag
ggcatcgacttctacgcgaccatcactcgggccaggttcgaggagctgaacatggacctc
ttcaggaagtgcatggagcccgtggagaagtgcctccgtgacgccaagatggacaagtcg
cagatccacgacgtcgtgctcgtcggaggctccacccgtatccccaaggtgcagcagctg
ctgcaggacttcttcaacggcaaggagctctgcaagagcatcaaccccgacgaggccgtc
gcgtacggcgccgctgtccaggccgccatcctcagcggcgagggcaaccagaaggtgcag
gacctgctcctgctcgacgtcacgccgctctcgctcgggctggagacggccggtggcgtc
atgaccgtgctgatcccgaggaacaccaccatcccgaccaagaaggagcaggtcttctcc
acctactccgacaaccagcccggcgtgctcatccaggtgtacgagggtgagcgcactcgg
accaaggacaacaacctgctcggcaagttcgagctgaccggcatccccccggcgccgagg
ggcgtgccccagatcaacgtgaccttcgacatcgacgcgaacggcatcctgaacgtgtcg
gcggaggacaagacgacggggaagaagaacaagatcaccatcaccaacgacaagggccgg
ctgagcaaggaggagatcgagcgcatggtgcaggaggcggagaagtacaagtcggaggac
gaggaggtgaagcgcaaggtagaggcccggaacgcgctggagaactacgcgtacaacatg
cgcaacacggtgcgggacgagaagatcgcgtcgaagctgcccgcggaggacaggaagaag
atcgaggacacgatcgaggacgccatcaagtggctggacggcaaccagctcgccgaggcc
gaggagttcgaggacaagatgaaggagctggagagcatctgcaaccccatcatctccaaa
atgtaccagggtgcgggcggcgccgcgggcatggacgaggacgcgcccagcggcggcgcc
ggcaccggcggtggcagcggcgccgggcccaagattgaggaggtggactaa
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