Panicum virgatum (switchgrass): 120691374
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Entry
120691374 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120691374
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120691374
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120691374
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120691374
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120691374
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
ULK family [OT]
120691374
Membrane trafficking [BR:
pvir04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
120691374
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120691374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ABC1
Kdo
ATG1-like_MIT2
Pkinase_fungal
YrbL-PhoP_reg
APH
Pox_ser-thr_kin
Motif
Other DBs
NCBI-GeneID:
120691374
NCBI-ProteinID:
XP_039830361
LinkDB
All DBs
Position
9N:70040549..70047197
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AA seq
682 aa
AA seq
DB search
MGDGASGRGGGGGGRRVGEYELLRPIGSGAYSQVWLGRHRARGTEVAVKEIAMERLSSKL
RESLLSEVDILRRIRHPNVIALHDSVKDHGRIYLILEYCRGGDLHAYLQRHKRVSETVAK
HFIRQLASGLQMLRDNNVVHRDLKPQNILLVENNENSLLKIADFGFAKFLQPFALAETLC
GSPLYMAPEVMQAQKYDAKADLWSVGVILYQLVTGIPPFNGDNQIQLLKNILRSREIRFP
SDCELSHGCIDLCRKLLRLNSVERLTVEEFVHHPFLSEQAPDRTLSRTPSDIRDLPSSQS
SQEDCMPFPLDDEPSEQDESPVPDSKSPMKSYGFPMGKRLDKISGQSPSRHIGLFSRYVL
GNNHPPSSQHHDRKGGYPEDSPIIDSLEFVDQEYVFVSGPHPEGSSSSTNASRQLNLPAK
YDNSSVSPPKLTLSSAPMPINGLPINRQQSAGTGSLDSHCSPASGTSQGSADMSDAIDQP
PSDYLTRIKLLEQYASAIAGLVKDEIKAGRLLEAFSIQLIVLATWKQAIHLCNTFVASPS
QDTPMKGPSADVPHLLANSQLVDDAYMQIERQFLSDVEYAEELASTVGQIAAGTEMPDAI
EIIFQSALHIGKRGGVGEMFGKAADAKIGYTRAVSMLRFLLIEAPSLALNPPLTLTRSDR
HRLRTYIEALNTRLGQMRSQRH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggcgccagcggccggggcggcggcggcggcgggcggcgggtgggggagtac
gagctgctgcggccgatcgggtcgggggcgtactcgcaggtgtggctggggcggcaccgg
gcgcggggcacggaggtggcggtgaaggagatcgccatggagcggctgagcagcaagctc
cgcgagagcctcctctccgaggtcgacatcctccgccgcatccggcaccccaacgtcatc
gcactccacgactccgtcaaggatcatgggaggatatatctcatattggagtattgccga
ggtggtgacttgcatgcataccttcaacggcataaaagagtttctgaaacagttgcaaag
catttcatccgtcagttagcatctggtctgcaaatgcttcgtgacaataacgtggttcat
cgagacctaaaacctcagaacattcttcttgttgaaaacaatgaaaattctctgttgaag
attgccgactttggatttgcaaagtttttgcaaccatttgcccttgctgaaacactttgt
ggttcaccactttacatggctccagaagtcatgcaagcacagaagtatgatgcaaaggca
gatctatggagtgttggtgtcattctctatcaacttgttactggaattccaccttttaat
ggggataatcagatccagctgctaaaaaatatactcaggtcacgtgaaatacgattccca
tcggattgtgagttgagccatggttgcattgatttgtgcagaaagttgttgcgactcaat
tcagtggagcggcttacagttgaagaatttgtgcatcacccatttctttctgaacaagct
ccagacaggaccttgagccggacaccatctgacataagagatttgccttcgagccaaagt
tctcaagaagattgtatgccttttcctttggatgatgagccaagtgaacaggatgagagt
ccagtccctgacagtaaaagtccaatgaaatcttatgggtttcccatgggtaaaagattg
gacaaaatttcaggccagagtccatcgagacatattggtctgttctccagatatgtcttg
ggtaataatcatcctcctagtagccagcaccatgaccgtaaaggtggttatcctgaagat
tcccctatcattgattcattagagtttgtagatcaggaatatgtctttgtgtctggacca
cacccagagggatcatcttcttcaacaaatgcctctcgacagctgaacttgccagcaaaa
tatgataattcatcagtttcaccacctaagttgactttatcgagtgcaccaatgccgata
aatggtttgccgattaatagacaacaatctgcggggactggtagcttggatagccattgt
tctccagcatctggcacttcacagggatctgcagacatgagtgacgccattgatcagccc
ccatctgattatctgacgaggattaaattgttggagcagtatgcatcagccatagcaggg
ttggtcaaagatgagatcaaagctggcagactcttggaggcgttctctattcagctaatt
gttcttgcaacctggaagcaagcaattcatttatgcaatacgtttgtagcctctccttcc
caggatacccctatgaaggggccaagtgctgacgttccccatttgcttgcaaactcccag
ctggttgatgatgcctacatgcagatagagagacagtttctctcagatgttgaatatgct
gaagaactagccagcactgtaggacagatagctgctggtacagagatgcctgatgctatt
gaaataatatttcagtccgccttacatataggaaaacgtggtggtgtcggtgagatgttt
gggaaagcagcagatgccaagattgggtatacaagggcagtatccatgctgcggtttctc
ctgatcgaggcaccatcactggccctcaacccccctttgactctgacaagatccgatcgg
catcggctgcgcacatatattgaagctctcaacaccaggcttggccagatgcgcagccag
aggcactaa
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