KEGG   Panicum virgatum (switchgrass): 120691386
Entry
120691386         CDS       T07260                                 
Name
(RefSeq) partner of Y14 and mago-like isoform X1
  KO
K14294  partner of Y14 and mago
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03013  Nucleocytoplasmic transport
pvir03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120691386
   03015 mRNA surveillance pathway
    120691386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120691386
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120691386
SSDB
Motif
Pfam: Mago-bind Med9 Allexi_40kDa
Other DBs
NCBI-GeneID: 120691386
NCBI-ProteinID: XP_039830374
LinkDB
Position
9N:complement(70480368..70485638)
AA seq 228 aa
MATSSDGGGGDQRRLLSIPKEGERIIAPTRRPDGTLRKAIRIRAGYVPQEEVAIYQSKGA
LMRKSGPDVPPGYDPALAVDAKPKTKAAKRNERRKEKRQQQASSTNDKGKGLDIEDAGAA
EIDKVLSSKADKQRDSVESVTKQIRGIAISESSAAPSTNANDSSQPESSAPDIDKKIRAL
KKKIRLAEAQLQGDPKKLKSETQEKLKKIEGWRAELKLLEDKKAPTGS
NT seq 687 nt   +upstreamnt  +downstreamnt
atggccacctccagcgacggcggcggcggcgaccagcgacgcctactctccatacccaag
gagggcgagcgcatcatcgcgccgactcgacgccccgacggcacgctccgcaaggccatc
cgcatccgcgccggctatgtgccccaggaggaggtcgccatctaccagtccaagggcgcc
ctaatgaggaagtcagggcccgacgtgccgccggggtacgacccggcgctcgcggtcgat
gccaagcccaagacgaaggcggccaagcggaacgagcgacgcaaggagaaacggcagcag
caggctagttcgacaaatgataaaggaaagggcctggatatagaggacgctggtgctgca
gaaattgacaaggttctttcttccaaagctgataagcagagggattcagtggaaagtgta
acaaagcaaataagaggcattgctatttctgaatcatctgcagcaccatccacaaatgcc
aatgatagctcacaaccagaatcatctgctccagacatagataagaaaattcgagcactg
aagaagaagatacgtttagctgaagcgcagctgcaaggtgaccccaaaaaattgaaatct
gagactcaggaaaagttgaaaaagattgaagggtggcgtgcggagctgaagcttttggag
gacaagaaagctcccacgggttcctag

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