Panicum virgatum (switchgrass): 120691404
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Entry
120691404 CDS
T07260
Name
(RefSeq) myosin-3-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120691404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120691404
04131 Membrane trafficking [BR:
pvir04131
]
120691404
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120691404
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120691404
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120691404
mRNA cycle factors
P-body specific factors
120691404
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120691404
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120691404
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120691404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
nSTAND3
AAA_16
Nuf2_DHR10-like
Zeta_toxin
Csm1_N
ADIP
Motif
Other DBs
NCBI-GeneID:
120691404
NCBI-ProteinID:
XP_039830394
LinkDB
All DBs
Position
2K:complement(60484868..60498836)
Genome browser
AA seq
1237 aa
AA seq
DB search
MLSAATVMAPAAATQKSSLEVLLETIKKRDEQPKDAPPALPARPTCRGRLPTTRRPSLPA
GFKLENDMATVVAMETVPVDKKPDVEKEISGLETKEDKPVKGHIFGTKRKFHNSEVLEES
PYVESFHERKGTTVCKDPPSVSSASAKMNGKPACTDVMDYVRQKKLRVWCSSPNAKWELG
QIKSISGGDAEILLADGKVLTISPEMLLPANPDVLDGVDDLIQMSYLNEPSVLYNLQLRY
SRDLIYTKAGPVLIAVNPLKEVPLYGKTSIMQYKKKTKDDPHVYAVADLAFNEMLRDCIN
QSIIISGESGAGKTETAKIAMQYLAALGGASGMESEVLQTNVILEALGNAKTSRNDNSSR
FGKLIEIYFSETGKMCGAKIQTFLLEKSRVVQRAQGERSYHIFYQLCSGAPPFLKKKLFL
KSANDYNYLKQSNCLRIDGVNDSNKFTALVDALDTIQISKEDQMKLFSMLAAVLWMGNIS
FSVIDTENHVEVVSNEGLATAAKLLGCTSNQLVTAMSTRKIRAGNDSIIKKLTLPQAIDA
RDALAKSIYAHLFDWVVEQINHSLGTGRQCTWRSISILDIYGFECFNKNGFEQFCINYAN
ERLQQHFNRHLFKLQQEEYLEDGIDWAPVEFVDNTDCLSLFEKKPLGLLSLLDEESTFPK
ATDLSFANKLKQQLSGNSCFKGEQEGTFKICHYAGEVTYDTSGFLEKNRDPLHSDSIQLL
SSCKCELPKHFASVMVADSQNKSSQSWHSVVDTQKQSVVTKFKVQLFKLMQQLESTTPHF
IRCIQPNGKQCPRLFEHDLVLHQLKCCGVLEVVRISRTGYPTRMTHHQFAERYGFLLLRS
IASQDPLSVSIAVLQQLNIPPEMYQVGYTKLFFRTGQIAALENAKRKMLHGTLCIQKHFR
GLHFRQGYQGLKKGAMTLQSFIRGERARIHFDNVIKRWRAAVLIQKYTRRRIAATKFNDQ
LKHIILLQSVMRGCLARTKYKCLQNEKESKVSHNKAQGDMRKNISESRVCHEMNGHYPHQ
PVITELEGRISKAEAALRDKEEENVMLKQQLEQYERKWSEYEAKMKSMEEAWKRQLSSLQ
LSLVAAKKSLVSDDMATRTARSDFTPAHAQYNSEDTLSTGTHTPEVIESRHHNHHPEAKV
SAGNSDRRVNAVNHLEKEFEDRRQVFEDDAGFLVAVKSGQVGSNMNPDEELRKLKDRFAT
WKKDYKSRLKETKVNLQKVGTHDEKSRKRWWGKKSSK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgcggccaccgtgatggcacctgcagcagccacacagaagagctccctcgag
gtcttgctcgagacgataaagaagcgtgatgagcagcctaaggatgcccctccggcattg
ccggcccgaccaacgtgccgtggacggttgcccacgacaagacgaccctcactgccggcc
gggtttaagcttgagaatgacatggcaacagttgttgctatggagacggtgccggttgac
aagaagccagatgttgagaaagagatttctggcctggagaccaaggaggacaagccggtg
aaaggtcacatatttgggactaagaggaagttccacaattcagaagtgctggaggagtca
ccatatgttgagtcattccatgagaggaagggtacaacagtttgtaaggatcccccatct
gtctcctcggcatcggcgaagatgaacgggaagcctgcgtgcacagatgtcatggattat
gtccgccagaagaagctacgagtttggtgttcttctccaaatgcaaagtgggaacttgga
cagattaaatcgatatctggaggtgatgctgaaatactcctggctgatggaaaagttttg
acaatatcaccagaaatgctcttgcctgccaaccctgatgttcttgatggagtggatgat
ttgatccagatgagctacttgaatgaaccttcagttctttacaatctacaattgcgatat
tctcgtgatcttatctatacaaaagcaggacctgttttgattgccgttaatccattgaaa
gaggttccactctatggaaaaacttcaatcatgcagtacaagaaaaagaccaaggatgac
cctcatgtgtatgcagttgctgatttggcttttaatgagatgctacgagattgcataaac
caatccataataataagtggtgaaagcggagcaggaaaaactgagacggctaaaattgca
atgcaatatttggctgctctagggggtgctagtgggatggaatctgaggttcttcagacc
aatgttattcttgaagcattaggaaatgcaaaaacatcacgaaacgataactcaagtcga
tttggcaaacttatcgaaatatacttttctgaaactgggaagatgtgtggtgctaaaatt
cagaccttcctgcttgaaaagtcaagggtggttcaaagggcacaaggagagagatcttac
catattttctatcaactgtgctctggagctcctccctttctcaaaaaaaaattgtttctg
aaaagtgccaatgactacaattacttgaagcagagtaattgcttgagaattgacggtgtc
aatgattctaacaagttcacggcgctagtggatgcattggatactattcaaatatctaag
gaagaccaaatgaaattgttttctatgctcgcagctgtcttgtggatgggaaacatatca
ttctctgttatagatactgaaaaccatgtggaagttgtttcaaatgaagggttggctaca
gctgcaaagctgcttggctgcacttccaatcaactggtgactgctatgtccactcgtaaa
atccgagcaggaaatgacagtattattaaaaagctgacattgccgcaggccatcgatgca
agggatgcactagcaaagtcaatctatgctcatttatttgactgggtcgttgagcaaatt
aaccactcacttggaacagggaggcaatgtacatggagatccataagtattttagatatt
tatgggtttgagtgtttcaataagaatggctttgagcagttttgtataaattacgccaat
gagaggctgcagcagcactttaatcgtcatcttttcaaactacagcaagaggaatacttg
gaagatggaattgactgggctcctgtggaatttgtggataacactgattgcttatctctc
tttgagaagaaacctctagggctattgtcattattggatgaagagtctactttcccaaag
gcaacagacctttcctttgctaacaagcttaagcagcagttaagtggtaactcttgcttc
aaaggtgaacaagaaggcacttttaagatttgtcactatgcgggagaggtgacatatgat
acatctgggttcttggagaagaacagagatccgttgcactctgattcaatccaactactc
tcatcatgtaaatgtgaacttccgaaacattttgcttctgtcatggttgctgattctcag
aataagtcaagtcaatcatggcactcagtagtcgatacacagaaacaaagtgttgtcacc
aaatttaaggttcaactgttcaagctgatgcagcagttggagagcacaactcctcatttt
atccgatgcattcaaccaaatggcaaacaatgccccaggttattcgagcatgatcttgtc
ttgcatcagcttaaatgctgtggagtgcttgaagttgttcgaatatcaagaacgggctat
ccaactaggatgactcaccaccagtttgctgaaagatatggatttcttctcctgcgttct
attgcgtctcaagacccacttagtgtttcaattgctgttttgcagcagttgaatattccc
cctgaaatgtatcaagttggctacacaaaattgtttttccgtacaggacagattgctgca
ctggaaaatgctaaaaggaagatgctccatggaaccctttgtattcagaaacacttccgt
gggttgcattttcgacagggttatcagggactgaagaaaggagcaatgactttgcagtca
tttatacgcggtgaaagagcaagaatacactttgataatgtcatcaagagatggagggca
gctgttctcatacagaagtacactaggcgtcgaattgcagctaccaagtttaatgatcaa
ctgaaacatatcattcttcttcagtcagtgatgcgtgggtgcctggccaggacgaaatac
aagtgcttgcagaatgaaaaggagtcaaaggtcagtcacaacaaagctcaaggggacatg
aggaagaatatttcagagtcaagggtgtgtcatgaaatgaatgggcactatcctcaccaa
ccagtcatcacagaactcgagggtcgtatttcaaaagctgaggctgcattgcgggacaaa
gaggaagaaaatgtaatgctgaaacagcaattggaacagtatgagaggaaatggtcggag
tatgaggccaaaatgaaatctatggaagaggcatggaagagacagctctcttcattgcag
ctgagccttgttgctgctaaaaagagcctagtttctgatgatatggccactcgaaccgct
cgaagtgattttactccggcacatgctcagtataactctgaagatacattgtccaccggg
acccatacacctgaagtgatagagtcgagacaccacaaccaccatcctgaagccaaagtt
tcagcaggaaactcagataggcgggtaaatgctgtgaaccacctagaaaaggagttcgaa
gacaggcgacaggtgttcgaagacgatgcgggcttccttgtcgcagtcaagtctggtcag
gttggttcaaatatgaacccagatgaggaactccggaagctcaaggaccgctttgctaca
tggaagaaagattacaaatctcggttgaaggagacaaaggtcaatcttcagaaggttggc
actcatgatgagaaatcccggaaaagatggtgggggaagaagagctcaaagtga
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integrated database retrieval system
