Panicum virgatum (switchgrass): 120691420
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Entry
120691420 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type III, chloroplastic
KO
K08914
light-harvesting complex II chlorophyll a/b binding protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120691420
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120691420
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120691420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
HliA
Motif
Other DBs
NCBI-GeneID:
120691420
NCBI-ProteinID:
XP_039830414
LinkDB
All DBs
Position
2K:60483195..60484541
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AA seq
268 aa
AA seq
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MASTIMAATSRVLAAKTPFLGQGRAAAIASPLRDVAAAASGRITMGNDLWYGPDRVKYLG
PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE
KWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING
LDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
PLENLLDHLDDPVANNAWVYATKFAPGS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgatcatggccgccacctcccgcgtcctcgccgccaagaccccgttcctt
ggccagggccgcgccgccgccattgccagcccgctccgcgacgtcgccgccgccgccagc
ggccggatcaccatgggcaacgacctgtggtacggccccgaccgcgtcaagtacctgggc
cccttctccgcccagacgccctcctacctcaccggcgagttccccggcgactacggctgg
gacacggccgggctctccgccgacccggaggcgttcgcgcgcaacagggcgctggaggtg
atccacgggcggtgggcgatgctgggcgcgctggggtgcatcaccccggaggtgctcgag
aagtgggtgcgcgtggacttcaaggagcccgtctggttcaaggccggcgcgcagatcttc
tccgagggcgggctcgactacctgggcaaccccaacctggtgcacgcgcagagcatcctc
gccgtgctggggttccaggtcgtgctcatgggcctcgtcgagggcttccgcatcaacggc
ctcgacggcgtcggcgagggcaacaacctctaccccggcggccagtacttcgaccccctg
ggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaaggagatcaagaacggc
cgcctcgccatgttctccatgttcggattcttcgtgcaggccatcgtcaccggcaagggg
cccctcgagaacctgctcgaccacctcgacgaccccgtcgccaacaacgcctgggtctac
gccaccaagttcgcgcccgggtcttaa
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