Panicum virgatum (switchgrass): 120691438
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Entry
120691438 CDS
T07260
Name
(RefSeq) ubiquitin-conjugating enzyme E2 4-like
KO
K10576
ubiquitin-conjugating enzyme E2 H [EC:
2.3.2.23
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120691438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120691438
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
120691438
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120691438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
Prok-E2_E
Motif
Other DBs
NCBI-GeneID:
120691438
NCBI-ProteinID:
XP_039830441
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All DBs
Position
9N:79119626..79122110
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AA seq
183 aa
AA seq
DB search
MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFFVEFRGPNESIYQGGVWKVRVELPDAYP
YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
NGDAAALMMRDRPAYEQKVKEYCEKYAKPEDAGVVPEDRSSDEELSEEEDDSGDEEIMGK
PDP
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccaagcaagcgccgggagatggacctcatgaagctgatgatgagcgactac
aaggtggagatggtgaacgatgggatgcaggagttctttgttgaattccgtgggcctaac
gaaagcatttatcaaggaggcgtgtggaaggttagagtagaactgccagatgcatatcca
tacaaatccccgtcaattggtttcatcaataagatatatcacccaaatgtcgacgaaatg
tctggttcagtctgtttggatgtcatcaaccaaacatggagcccaatgtttgatcttgtc
aatgtgtttgaggtcttcctcccacaacttctactatatccgaatccttctgatccactg
aatggagatgctgctgcattgatgatgcgtgatcggcctgcttatgaacaaaaagtgaaa
gagtactgcgaaaaatacgccaaaccagaggatgctggggtagtcccagaggacaggtcc
agtgatgaagagctgagtgaggaagaagatgactccggtgacgaggagataatggggaaa
ccagatccgtaa
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