Panicum virgatum (switchgrass): 120691454
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Entry
120691454 CDS
T07260
Name
(RefSeq) ras-related protein RABF1-like
KO
K07887
Ras-related protein Rab-5A
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120691454
04145 Phagosome
120691454
04148 Efferocytosis
120691454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120691454
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120691454
04031 GTP-binding proteins [BR:
pvir04031
]
120691454
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120691454
Endosome - Lysosome transport
120691454
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120691454
Exosomal proteins of other body fluids (saliva and urine)
120691454
Exosomal proteins of colorectal cancer cells
120691454
Exosomal proteins of bladder cancer cells
120691454
GTP-binding proteins [BR:
pvir04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120691454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
ATPase
MMR_HSR1
AAA_7
MMR_HSR1_Xtn
TniB
AAA_29
AAA_16
Motif
Other DBs
NCBI-GeneID:
120691454
NCBI-ProteinID:
XP_039830463
LinkDB
All DBs
Position
9N:78811270..78814730
Genome browser
AA seq
200 aa
AA seq
DB search
MGCSPSVPARSTGGLNTVNNDTSSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPES
FNKAQYWVKELQKHGSPGIVMVLVGNKADLHENRSVSSQDAQEYAEKNNMFFIETSAKTA
DNINQLFEEIAKRLPRPTMS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcgccctccgtgccagctagaagtacaggagggctgaacactgtcaacaac
gatacctcttctgccactgattcaaaggacttgcgtgctaagttggtattactgggagac
tcaggtgttgggaaaagctgcatcgttcttcgctttgttcgtggtcagtttgatcctact
tccaaggtaactgttggtgcatcttttttatcacaaacattggcattggaagactcaaca
atagtgaaatttgaaatttgggatactgctggccaagagaggtatgctgccttggcacca
ctttactacagaggagctgctgctgcaattgttgtttatgatataactagtccggaatca
tttaacaaagcacagtactgggtaaaggaacttcagaagcatggtagtcctggtattgta
atggttttggttggcaataaggctgacctgcatgagaatcgaagtgtatcttcacaggat
gcacaggagtacgcagagaagaacaatatgttttttatcgagacgtcagcaaagacagca
gataatataaaccaactatttgaggaaattgcaaagaggttgcctaggccaacgatgtcc
tga
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