Panicum virgatum (switchgrass): 120691480
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Entry
120691480 CDS
T07260
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like
KO
K19001
ATP-dependent DNA helicase
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120691480
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120691480
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120691480
NCBI-ProteinID:
XP_039830486
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Position
9N:complement(10044216..10050498)
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AA seq
866 aa
AA seq
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MKWGLGALSGGRPMVEEMVVAVANGVKAEVAPAAATADSPKSVLEDEKISHPNIGNASLA
TEPTKQEEESSDDFVDASSSLPVDLEINIASVHPVVEEEQLPDDLEINIASVHPVVEEEQ
LPEPVKEEEVDGFLDESLSVPIDLEAKNGDASLITEAMKKEEELLEEARIKAEEEEETRK
REEAARLAFDPEARYSKLDDLLSKTQLFSEFLLQKMDQIADEVVEPQAEEPPAEEKKKGR
GRKRKAKAVPQYNDKKAKTAVAAMLTRSREERLADDCTLSEEERWNKEQANLVPLMTGGK
LKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMHGPYMVIAPLST
LSNWVNEISRFVPSVTSIIYHGDKVVRAEIRRKFMPKTNDAVSPDFPIVVTSYEMAMSDA
KFLAHYKWKYVVVDEGHRLKNSKCKLLREMKRIPMDNKLLLTGTPLQNNLAELWSLLNFI
LPDIFSSHEEFESWFDFSGKASEEKETEEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLP
RKKEIIIYANMTELQKRIQDHLVEKTFDVYLNEESDIVLRRPGIKAKLNSLFIQLRKNCS
HPDLLEAAFGTTSLYPPVDKLLEQCGKFQLLDRLLTSLLARKHKVLIFSQWTKVLDIIEY
YLDSKGLEVCRIDGSVKLEERRRQIAEFNDLNSNMNVFILSTRAGGLGINLTSADTCILY
DSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRIIKKAFGKLKLEHVVIGKGQF
EQERAKPNVLEEGELLALLRDEQAEEDKMIETDISDEDLLKLMDRSDLSGPPGAADAVPL
IPLKGPGWEVVVPTKSGGGMLSSLTS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggggtttaggggctttatctggtggtagacccatggtagaagagatggtagtc
gccgtggcgaacggggtgaaggcggaagtcgcccccgccgctgccacggcagattctcct
aaatccgttctggaggacgagaaaatttctcaccccaatatcgggaacgcctcccttgcc
actgagccaactaagcaagaggaggagagctcggatgattttgtggatgcaagctcgtcc
ctgcctgtggaccttgaaatcaatattgctagtgtgcaccctgtcgtggaggaagagcag
cttccggatgaccttgaaatcaatattgctagtgtgcaccctgtcgtggaggaagagcag
cttccggagcctgtcaaggaggaggaagttgatggtttcttggatgaaagtttatctgtg
cctattgatcttgaggccaagaatggcgatgcatccctgatcacagaagcaatgaagaag
gaagaggagctgcttgaggaggcgcggattaaggcagaggaagaagaggagaccaggaag
agggaagaagctgcaagacttgcttttgatcctgaggcacggtatagcaagttagatgac
ttgctgtcgaagacacaactcttttcagagtttttacttcagaaaatggatcaaatcgct
gatgaagttgttgaacctcaagctgaagagccgccggcagaagaaaagaagaaaggacgt
ggccggaagagaaaagctaaagctgtgccccaatacaatgataaaaaggctaagacggca
gtggcagccatgcttacaagatctcgtgaagaacgcctcgctgatgattgtactctctca
gaagaagaaaggtggaacaaagagcaagccaatcttgtgcctttaatgactggtgggaag
ttgaagtcataccagataaagggtgtgaagtggctaatttcattgtggcagaatgggctc
aatgggatactggctgaccagatgggccttgggaaaacaatccaaacaattggatttctt
gctcatctgaaagggaaaggaatgcacggtccatacatggtaatcgctcctttgtccact
ctctcgaactgggtgaatgaaatctcgaggtttgttccatctgtcactagtatcatttat
catggagataaagtggtccgggctgagataagaagaaaattcatgcctaaaactaacgat
gctgttagccctgattttccgatagtagtgacttcatatgagatggccatgtcagatgca
aaatttcttgctcactataagtggaagtatgttgttgtggatgaggggcatcgtttgaaa
aattctaagtgtaaattgttaagggagatgaagcgcataccaatggataataaactcctt
ttgactgggacaccccttcagaacaatcttgcagagctgtggtcactactgaacttcatt
ttgcctgatatattctcatcacatgaggaatttgaatcatggtttgatttttctggaaaa
gcaagtgaagaaaaagaaactgaggagaaaagaagggttcatgttgtttcaaagcttcat
gccattttgcgtccattccttctaaggcggatgaaagaggatgtagagcagatgcttcca
cgaaagaaagagataatcatttatgctaacatgactgaacttcagaagcgaatccaggat
cacttagttgagaaaacatttgatgtctacttgaatgaagaatcagatattgtgttgcgg
aggcctggcattaaggcaaagctaaatagtctttttattcaactaaggaagaattgcagt
catcctgatcttttggaagctgcatttggaacaacaagcctgtacccacctgttgataag
cttctagagcaatgtggcaaatttcagcttctggacagattactaacttcgctacttgca
cgaaagcacaaggttctaatattttcacaatggacaaaagttttggacattattgagtat
tacctagattcaaaaggcctcgaggtttgcagaattgatggtagtgttaagttggaagag
aggaggaggcagatagcagaatttaatgacttgaatagcaatatgaatgtcttcattctg
agcacacgggctggtgggcttggtatcaaccttacttctgctgatacttgtatcctatat
gacagcgactggaatcctcagatggatctacaggccatggatcgatgccaccggattggt
cagacacggccagtgcatgtatataggctggcaacatcacattctgttgaggggcggatc
atcaagaaagcttttgggaagttgaaactagagcacgtggtgatagggaagggacagttt
gaacaagagagagcaaagcctaatgtcttagaggaaggggagctgctggcactgctcagg
gacgagcaggccgaggaagacaagatgatcgagaccgacatcagcgacgaagatcttttg
aagctgatggaccggagcgacctgtcaggaccgcctggtgctgctgacgctgtgccactg
atccctctgaaaggccctggctgggaggtcgtggtgcccacaaagagcggtggcggcatg
ctctcgtcgcttaccagctga
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