Panicum virgatum (switchgrass): 120691508
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Entry
120691508 CDS
T07260
Name
(RefSeq) chitinase 11-like
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120691508
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120691508
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120691508
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Motif
Pfam:
Glyco_hydro_19
Motif
Other DBs
NCBI-GeneID:
120691508
NCBI-ProteinID:
XP_039830518
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Position
9N:complement(80154247..80155609)
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AA seq
256 aa
AA seq
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MRNQVFAVLALAGAALLAAAGGASGQQSIITRQVFESMLSHRGDSGCQGAFYTYDAFTQA
AARFPAFGTTGDDRTRRRELAAFFGQTSHETTGGWSTAPGGPFAWGYCRVEEQSQTDPPY
YGRGPIQLTHKYNYEQAGRALNLDLVGNPDLVSRNPVVAFETALWFWMTPQAAKPSCHDV
ITGRWAPGADDRRAGRLPGYGLLTNIINGGLECGKGQPTDGDNDRVGFYRRYCKMLGVAE
GGNLSCENQTPYAPAG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatcaggtcttcgcggtgctggccctcgccggcgccgcgctgctcgccgcggcc
ggcggcgccagcgggcagcagagcatcatcacgcggcaggtgttcgagagcatgctcagc
caccgcggcgacagcggctgccagggcgccttctacacctacgacgccttcacccaggcc
gcggccaggttccccgccttcggcaccaccggcgacgaccggacacgccggcgggagctc
gccgccttcttcggccagacctcacatgaaaccaccggtggatggtcaactgctccgggc
ggaccgttcgcctggggatactgccgcgtggaagaacagagtcagacggacccaccctac
tacggacgtggacccatacaactcactcacaaatacaactacgagcaggccggtcgggcg
ttgaatctggacctggtgggcaaccctgacctggtgtcgcgcaaccccgtggtggccttc
gagacggcgctctggttctggatgacgccgcaggcggcgaagccgtcgtgccacgacgtg
atcaccggccgctgggcgcccggcgccgacgaccgccgcgcggggaggctccccggctac
ggcctcctcaccaacatcatcaacggcgggctcgagtgcggcaagggccagccgaccgac
ggcgacaacgaccgggtcgggttctacaggaggtactgcaagatgctcggagtggcggaa
ggtggcaacctgtcctgcgagaaccagacgccgtacgcacccgccggctaa
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