Panicum virgatum (switchgrass): 120691522
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Entry
120691522 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120691522
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120691522
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120691522
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120691522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120691522
NCBI-ProteinID:
XP_039830532
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Position
9N:65387977..65393976
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AA seq
643 aa
AA seq
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MKATAPPAKRRRGPRLAVLALVFCSLLVPIAFLFNRFPAVYVTDERPQQEIDLPSFDHRT
EFESGGSVNEVSSNSAGVIEVNAEAHNASNKISGSSKDSQNAIDDDPSSISTKPKVLPPP
KIEQPVLPPPKVEQPKPEVKPVRLPVQQAEGDRVNIRPRRVQNADEVEKAKSCQLEFGSY
CLWSIEHKEVMRDAVVKRLKDQLFVARSYYPSVAKLKGKEALTRELKQNIQEHERVLSES
IVDADLPSFIKKKIERMDQSIARAKSCTVDCNNVDRKLRQILHMTEDEAHFHMKQSAYLY
NLGVHTMPKSHHCLNMRLTVEYFKSTPLDPDDSPAHKFNIPEHRHYVILSKNVLAASVVI
NSTVSSCEDTENVVFHILTDAQNFYAMKHWFARNSYRESAVDVINYEQIIFENFPEFGTQ
LLYLPEEFRVFISNLERPTEKSRMEYLSVFSHSHFFIPEIFKDLRKVIILDNDVVVQRDL
SFLWNLDMGDKVNGAVRFCGLKLGQLRNLLGRTIYDPQSCAWMSGVNVIDLDKWREHNVT
ENYLQLLRKFGNNDDEASLRAAALPISLLSFQHLLYPLDERLTLSGLGYDYGIKEEVAQS
SASLHYNGNMKPWLELGIPDYKKYWKRFLTRDERFMDECNVSP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgacggcgccgccggcgaagcggcggaggggcccgcggctggcggtgctggcg
ctcgtcttctgctcgctgctcgtgccgatcgccttcctcttcaaccgcttccccgccgtg
tatgtgacggatgagcgcccccagcaggagattgacttgccttcatttgatcatcgcacg
gagttcgaaagtggtggctctgtaaatgaagtaagttcaaacagtgcaggtgtcattgaa
gttaatgcagaggcacataatgcatccaacaagatttctgggagcagtaaggactcgcag
aatgctattgatgatgacccttccagcattagcactaaaccgaaagttctcccccctcca
aaaattgaacaaccagttcttccccctccaaaagttgaacaaccaaaaccagaagtgaag
ccggtacgacttccagtacaacaagcagaaggtgaccgagtgaatattaggcctcgcaga
gttcaaaatgctgatgaagtggaaaaggctaagtcttgtcaacttgaatttgggagttac
tgtctctggtccatagaacacaaagaagttatgagagatgctgttgtgaaaaggctgaaa
gatcagctatttgtagcccgatcttactacccaagcgttgcaaaacttaaaggaaaagag
gcactgactcgtgagttgaagcaaaatattcaagaacatgagagggttctcagtgaatcc
attgttgatgctgacctaccatcctttataaaaaagaagatagagaggatggaccaatca
attgcaagagccaaatcatgcactgtggattgtaacaatgtcgacagaaagcttcgtcaa
attcttcatatgacagaggatgaagctcattttcatatgaaacagagtgcatacctatac
aatctcggtgttcacaccatgcccaaaagtcatcattgccttaatatgaggttgacagta
gaatattttaaatccacgccattggatccagatgactcccctgcccataagttcaacatt
cctgagcataggcactatgttatattatctaaaaatgttcttgcagcctctgttgtcatc
aactcaactgttagtagctgtgaggatactgaaaatgtagtctttcatatactaactgat
gctcaaaatttctatgccatgaagcactggtttgcaagaaactcctacagggaatcagcc
gtcgatgtcataaactatgagcagattatttttgagaatttccctgagttcggaactcag
ctgttgtatttgcctgaggaatttcgtgtcttcatcagtaatcttgagcggcctactgaa
aagagtagaatggagtatttatcagtgttcagtcattcacatttctttattccggaaata
ttcaaagatttaaggaaggtaattatcttggacaatgatgtggttgttcaacgtgatctc
tctttcttgtggaatcttgatatgggagataaggtcaatggtgcagttagattttgtggt
ttgaaacttggccaattgaggaaccttttgggtaggacaatatatgatccacagtcatgt
gcatggatgtctggagtgaatgtgattgatttggacaaatggagggagcataatgttaca
gagaattacttgcaacttctgagaaagtttggaaacaatgatgatgaggcctcactgcga
gctgcagctttgcctataagtttgttgtccttccagcatcttctatacccacttgatgag
agattgactttatctggactgggatatgactatggtattaaagaagaagttgcccagagt
tccgcatcattgcactacaatggaaatatgaaaccttggcttgagttgggtataccagat
tataagaagtactggaaaaggtttcttacacgagatgagagattcatggatgagtgcaat
gtaagtccatag
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