Panicum virgatum (switchgrass): 120691651
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Entry
120691651 CDS
T07260
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5-like
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120691651
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120691651
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
120691651
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
DUF7194
Motif
Other DBs
NCBI-GeneID:
120691651
NCBI-ProteinID:
XP_039830727
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All DBs
Position
9N:3572191..3576606
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AA seq
325 aa
AA seq
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MEETLAVESAAGEAPAAVASERKEETLEEVLSRHRKEKSKLQDKETSLKKAAAKGSKAEQ
KAKKKQVEEEITRLSAELEAKHAAELASFGYKPSGSSEKGNLDNLVKAIAGVSMSSNLDS
AKPSKGARRREKKAKEEAAREQRIQEEQSNLVSDRMLEKEKLESKLEPLGLTIQEIKPDG
HCLYRAVENQLLLHSKGTARYSYQDLRQMTAKYMREHADDFLPFFLAEGKAETGSDPSES
FEKYCQEIESTAAWGGQLELGALTHCLKKHIVVYSGSFPDVEMGQEYKSGSGGSSVGDAS
IRLSFHRHAYGLGEHYNSVIPTESS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaccctagccgtcgaatccgccgccggcgaggcgcccgccgcagtggcgtcg
gagcggaaggaagagacgctcgaggaggtgctctccaggcacaggaaagaaaaatccaaa
ctccaggataaagaaacaagcctgaagaaagctgctgccaaaggaagcaaagcggagcag
aaggctaagaaaaagcaagtagaagaagagattacacgcctgtcagctgagttagaggcg
aaacatgctgcggagcttgcttcttttgggtacaaaccctcaggcagctcagaaaagggt
aaccttgacaacctagtgaaggccatagctggtgtttccatgtccagcaatttggattcc
gcaaagcccagcaagggtgcacggcgacgagagaagaaggcaaaggaggaagctgctcgg
gagcaacggatccaagaagaacaaagcaatcttgtcagcgaccgcatgctggaaaaggag
aagcttgaaagtaagcttgagcccttggggctgaccattcaagaaataaagccagatggc
cactgcctgtaccgtgctgtcgaaaaccagttgttgctccattccaagggcactgcacgg
tacagctaccaggacctacgacagatgacagccaagtacatgagggagcacgcagacgac
ttcctcccgtttttcttagcagaaggcaaggctgagactgggtcagatccctctgagagc
tttgagaagtactgccaggagatcgagtccacggcagcctggggtggacagcttgagctt
ggtgcgctgacccactgcctcaagaagcacatcgtggtctactcaggctccttcccagat
gtggaaatgggccaggaatacaaatctggatccggaggtagtagtgtgggggatgctagc
atcaggttgtcctttcataggcatgcgtatggtcttggtgagcactacaactcggtgatt
ccaactgagtcatcataa
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