KEGG   Panicum virgatum (switchgrass): 120691659
Entry
120691659         CDS       T07260                                 
Name
(RefSeq) ras-related protein RABE1c-like
  KO
K07901  Ras-related protein Rab-8A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120691659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120691659
   03036 Chromosome and associated proteins [BR:pvir03036]
    120691659
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120691659
   04031 GTP-binding proteins [BR:pvir04031]
    120691659
Membrane trafficking [BR:pvir04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    120691659
 Autophagy
  Other autophagy associated proteins
    120691659
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    120691659
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120691659
  Exosomal proteins of other body fluids (saliva and urine)
   120691659
  Exosomal proteins of colorectal cancer cells
   120691659
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    120691659
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA C2c1_Nuc-II AAA_29 AAA_22 AAA_16
Other DBs
NCBI-GeneID: 120691659
NCBI-ProteinID: XP_039830732
LinkDB
Position
9N:complement(2546740..2549842)
AA seq 214 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR
LSETDSKPEDRTIKIKAEGEADASDAQKSACCGS
NT seq 645 nt   +upstreamnt  +downstreamnt
atggcagcgccgccggcgagggctcgagccgactacgactacctcatcaagctgcttctc
atcggagacagcggtgttggaaaaagttgtcttctcttacggttttcagatggctccttc
accactagcttcatcactactattggtattgacttcaagataaggaccgtcgagttggat
ggcaaacggattaagttgcagatctgggatactgcaggccaagaacgtttccgcactatt
acaactgcctattacaggggagctatgggcattttacttgtgtatgacgtcacagacgag
tcgtcttttaataacataagaaattggatcagaaacattgaacaacatgcctcggataat
gtgaacaaagttctggttggcaataaagctgatatggatgaaagcaaacgggctgttccc
acttctaaggggcaagctcttgctgatgaatatgggataaaattctttgaaacgagtgca
aagacaaacctgaatgtcgagcaggttttcttttctattgcaagggatatcaaacaaaga
ctctcagagactgattcgaagcctgaggatcgaactatcaagatcaaggccgaaggggaa
gctgatgcatcagatgcacagaaatcagcttgctgcggctcctga

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