Panicum virgatum (switchgrass): 120691844
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Entry
120691844 CDS
T07260
Name
(RefSeq) protein NODULATION SIGNALING PATHWAY 2-like
KO
K27745
protein nodulation signaling pathway 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120691844
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120691844
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GFIT
Motif
Pfam:
GRAS
DUF6457
Motif
Other DBs
NCBI-GeneID:
120691844
NCBI-ProteinID:
XP_039830973
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Position
9N:complement(70398834..70400738)
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AA seq
559 aa
AA seq
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MDVTMDDMPGDLDFSGCSSTTTSSSSPSLDDGMGMYAWNGLSPVADWGSFCPDDSSQDLH
GLIESMLCDDTLADLHPAMFPDEVYCCTNGSAPSSTTTTNPGTPVNDGDAAQGDGPEKGL
RLLHLLMAAAEALSGPHKSRELARVILVRLKQMVSHIGDNGAVSNMERLAAHFTDALQGL
LDGSHPVGGAGRHAAAAASHHQHTGDVLTAFQMLQDMSPYMKFGHFTANQAILEAVAGDR
RVHVVDYDIAEGVQWASLMQAMISRPDGVPPPHLRITAVSRGGGGGARAVQEAGRRLAAF
AASIGQPFSFGQCRLDSDERFRPATVRMVKGETLVANCVLNQAAATTTVRRPTGSVASFL
AGMATLGAKVVTVVEEDQGEPDKDEEEAGGFVARFMEELHRYSAVWDSLEAGFPTQSRVR
GLVERTILAPNIAGAVSRAYRAVDGDGAARAGWGEWMRGNGFRAVPLSCFNHSQARLLLG
LFNDGYTMEETSPNKIVLGWKAQRLLSASVWAPPPLSVPSSPAEGAFQPVGIAPASGGVG
RMEFDYIDSFLVEPAYALV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaccatggacgacatgcccggggatctcgacttctccggctgcagctccacg
accacctcgtcgtcgtcgccgtcgctggacgacggcatggggatgtacgcgtggaatggg
ctgtcccccgtggccgactggggctcgttctgccctgacgacagcagccaggacctgcac
ggcctcatcgagtccatgctctgcgacgacacgctcgccgacctccacccggccatgttc
ccggacgaggtgtactgctgcaccaacggctccgccccgagcagcaccaccacgacgaac
ccgggcacacccgtgaacgacggcgacgcggcgcagggcgacggccccgagaagggcctc
cgcctgctccacctgctcatggcggcggccgaggcgctctccggcccgcacaagagccgg
gagctggcacgggtgatattggttcggctcaagcagatggtatcccacatcggcgacaac
ggcgccgtctccaacatggagcgcctcgccgcgcacttcaccgacgcgctgcaggggctg
ctcgacggctcccaccccgtcgggggagccggcaggcacgccgccgcggcagcgtcccac
caccagcacaccggcgatgtgctcacagcgttccagatgctgcaggacatgtcgccgtac
atgaagttcgggcacttcaccgcgaaccaggccatcctcgaggcggtggcgggcgaccgg
cgcgtgcacgtcgtcgactacgacatcgccgagggcgtccagtgggcgtcgctgatgcag
gccatgatctcgcgccccgatggcgtgccgccgccgcacctgcgcataaccgccgtctcc
cgaggaggcgggggcggcgcccgggcggtgcaggaggccggccggcgcctcgccgccttc
gcggcgtccatcgggcagcccttctcgttcggtcagtgccgtctcgactccgacgagagg
ttccggccggcgacggtccgtatggtcaagggggagacactcgtcgccaattgcgtgctc
aaccaagccgcggcgaccacaaccgtcaggcgccccaccggctcggtggcgtctttcctg
gccggcatggcgacgctcggcgccaaggtcgtgacggtggttgaggaggatcaaggggaa
cccgacaaggacgaggaggaggcgggcggcttcgtggctcggttcatggaggagctccac
cggtactcggcggtgtgggactcgctggaggccgggtttccgacgcagagccgtgtgcgc
ggcctggtggagcggaccatcctcgccccgaacatcgccggcgccgtgagccgcgcgtac
cgtgccgtggacggcgacggcgcggcgagggccgggtggggggagtggatgcgcggcaac
gggttcagggccgtgccgctgagctgcttcaaccacagccaggccaggctgctgctcggc
ctgttcaacgacgggtacacgatggaggagacgtcgccgaacaagatcgtgctcgggtgg
aaggcccagcggctgctgtcagcgtccgtgtgggccccgccgccgctgtcggtgccgtcg
tcgccagcggagggggcattccagcccgtggggatcgcgccggccagcggtggcgtgggc
cggatggagtttgactacatcgactcgtttctcgtcgagcctgcttatgcgctagtttga
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