Panicum virgatum (switchgrass): 120691927
Help
Entry
120691927 CDS
T07260
Name
(RefSeq) E3 ubiquitin protein ligase DRIP2-like
KO
K16277
E3 ubiquitin-protein ligase DRIP [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120691927
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120691927
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120691927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
RAWUL
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120691927
NCBI-ProteinID:
XP_039831066
LinkDB
All DBs
Position
9N:16121665..16127359
Genome browser
AA seq
515 aa
AA seq
DB search
MQPGPTSPDNPPSPAPAPPPDPAPGADDAAVEPDPPAVPAPAAAPAEEEEEDKGRRGARG
RKRRRRGGPAAFSSSSPAATAPAPAGPRGLVMVKRDLLARCMTCPLCRRLLRDATTISEC
LHTFCRKCIYQKFSDEEVECCPVCKIDLGCTPTEKLRADHSLQDVRSKLFPFKRKKIKAE
EVASPISLPTKRKERSISSLVVNTPKVKSTGLTGRRTRAVARKASAAAASALHGLGPITE
DPVKKEFDSCDSHSHSSSLPANSNKALQTRRQIPSNAEASNQSSNKDTESDSKELADKAE
LWQPLNCLVEAANRTKSFRSSSQNPVVKGDQLNGSPSSTYASKTKARENLQKSKIEDDKK
DVPVTPVLPKRRGQGPTRRRRRREVQAPADAKPDAAAAQNEKKFSSIWFSLIASFDQQGD
PPLPQIPSHYLRIKDGNVPTSSIQKYLVQKLSLPSESEVEIKCCEQIVNPAQPLRNLVEL
WLKGRATQTTQTMTSSSAKEFVMVLTYGRPMAPAL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccgggcccacctcgccggacaatcccccgtcgcccgcgcccgcgccgccgccg
gaccccgcgcccggcgctgacgacgccgcggtcgagccggacccccccgcggtgccggcg
ccggcggcggcaccagcagaggaggaggaggaggacaaggggaggaggggcgccaggggg
aggaagaggcggcgccgcggcgggcccgccgcgttctcctcctcctcccccgccgcgacg
gcgcccgcgcccgcggggccgcggggcctcgtcatggtcaagcgggacctgctcgcgcgc
tgcatgacgtgcccgctctgccgccgcctcctccgcgacgccaccaccatctccgagtgc
ctccacacattttgcagaaagtgcatataccagaagttcagtgatgaggaagtagaatgc
tgcccagtatgtaaaattgatcttggctgcactcctactgagaagcttagagctgaccat
agtttacaagatgtaagatcaaaactttttccattcaaaagaaagaagattaaggcagaa
gaagttgcatctcctatttcacttcccactaaaaggaaagagaggtctatctcttcacta
gttgtcaatacacctaaagtaaaatcaacaggcttgactggacggcgaacaagagcagtt
gccaggaaagcttctgcagctgctgcttctgccttgcatggccttggtccaattactgaa
gatcctgtgaaaaaggaatttgacagttgtgacagtcattctcacagttcaagtttgccc
gctaattcaaacaaagcactgcaaacaagaagacagataccatcaaatgcggaggcatct
aaccaatcctccaataaagataccgagagtgatagtaaggagttggcagacaaggctgag
ctttggcagcctttaaattgtttagttgaagctgcgaacaggacaaagtcctttaggtca
agttcacagaatccagttgttaagggagatcaactcaatggctctcccagtagcacatat
gctagcaaaacaaaagcaagggagaatctgcagaagtccaaaattgaggatgacaagaaa
gatgttcccgtgacacctgtgctgccaaaaaggagaggtcagggtcctactcggaggagg
aggaggagagaggttcaagctccagcggatgcaaagcctgacgctgcagctgcacagaat
gagaagaagttcagttccatatggttttcattgattgcctcgttcgaccagcaaggagat
ccacctttaccacagataccttcccactacttgcgaataaaagatggaaatgtacccact
tcatctatccaaaagtaccttgtgcagaagctcagccttccaagtgagtctgaggtggaa
ataaagtgttgcgagcagatagtgaaccctgcgcaacctcttcggaatttagttgagctg
tggctgaagggaagagcaacacagacaactcagaccatgaccagctcctccgcaaaagag
tttgtaatggtgctgacatatgggcggccaatggctcctgcattgtga
DBGET
integrated database retrieval system
