Panicum virgatum (switchgrass): 120692029
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Entry
120692029 CDS
T07260
Name
(RefSeq) PRA1 family protein E-like
KO
K20359
PRA1 family protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120692029
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120692029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRA1
Glyco_transf_20
DUF3040
Motif
Other DBs
NCBI-GeneID:
120692029
NCBI-ProteinID:
XP_039831172
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Position
9N:4101875..4103104
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AA seq
238 aa
AA seq
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MSSSSASWSRYGAVPTSPLPPPTRPEGVAAAVAVADGAAGGEEVAPAPSSSPAATATAAE
AGVAFFSRARAFAGSAAGRPRAWREVLDPTAFSRPKSCGEARARARRNLAYFRANYALAA
LVLVFLGLVYRPVSMLVFLALFVAWLGLYFGRGEGEPLVCLRREVDDRVVLAVLSAVTVL
AVALTRAGLNLLISLVVAAAVIGVHAAFRVNYYLDERDAFDVAGSSFTDNGYGYTLPR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcctccgcgtcgtggtcgcgctacggcgccgtccccacctctcccctgccc
ccgccgaccaggccggagggtgtcgcggccgcggtggcggtggcagacggggcagcaggc
ggcgaggaggtggctcccgcgccctcgtcgtcgccggcggcgacggccacggcggcggag
gccggggtcgccttcttctcccgcgcgcgggcgttcgcggggtccgcggcggggcggccg
cgcgcgtggcgggaggtgctggacccgacggcgttctcgcgccccaagagttgcggggag
gcccgggcgcgggcgcggcggaacctcgcctacttccgcgccaactacgcgctggcggcg
ctcgtgctcgtcttcctcggcctcgtctaccgcccggtgtccatgctcgtgttcctggcg
ctcttcgtcgcctggttgggcctctacttcggccgcggcgagggggagccgctcgtctgc
ctccgccgcgaggtcgacgaccgcgttgtgctggccgtgctctcggccgtcacggtgctc
gccgtcgcgctcacccgcgccgggctcaacctcctcatctcgctcgtcgtcgccgcagcc
gtcatcggcgtgcacgccgcgttcagggtgaactactacctcgacgagagggacgcgttc
gacgtcgccggcagctcattcaccgataacggatatggctacacgctcccgagatga
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