Panicum virgatum (switchgrass): 120692044
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Entry
120692044 CDS
T07260
Name
(RefSeq) ABC transporter G family member 5-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
pvir04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120692044
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120692044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120692044
04147 Exosome [BR:
pvir04147
]
120692044
04090 CD molecules [BR:
pvir04090
]
120692044
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120692044
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120692044
CD molecules [BR:
pvir04090
]
Proteins
120692044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_29
AAA_16
AAA_21
RsgA_GTPase
ABC2_membrane_3
SMC_N
AAA_22
nSTAND1
MeaB
nSTAND_NTPase5
DUF87
nSTAND6
AAA_28
MMR_HSR1
NB-ARC
P-loop_TraG
Thymidylate_kin
NACHT
RNA_helicase
AAA_23
nSTAND3
APS_kinase
Motif
Other DBs
NCBI-GeneID:
120692044
NCBI-ProteinID:
XP_039831183
LinkDB
All DBs
Position
9N:complement(68993472..68996177)
Genome browser
AA seq
786 aa
AA seq
DB search
MSRFVDKLPFFDRRSSPMEEAEDIPRNGLLHVHHHHHHQQPPHHSGLLMQPQPSPPTKQS
SFTLAQLLKRVNEARSDASSPTSSPTHSHYTIELGGSVPGSTGSDLSEHMHGGGGDGPLL
PFVLKFTDLTYSVKQRKKGSCLPFGRAGGETAEPEVPRMKTLLDNISGEAREGEIMAVLG
ASGSGKSTLIDALANRIVKESLHGSVTLNGESLDGNLLKVISAYVMQDDLLYPMLTVEET
LMFAAEFRLPRSLPTKEKKKRVQALIDQLGLRNAAGTIIGDEGHRGVSGGERRRVSIGVD
IIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSVVVMSIHQPSYRILGLLDRLLFL
SRGQTVYYGPPGALPSFFDDFGKPIPGNENPTEFALDLIRELETMPDGARDLVEHNKKWQ
TRMAPKMMKHHDDGKPSPSLSLKEAISASISRGKLVSGATDGSVSAPAAAVSKFANPFWV
EMGVLTRRAFINTKRTPEIFVIRLAAVLVTGFILATIFWRLDDSPKGVEERLGFFAIAMS
TMFYTCSDALPVFLNERYIFLRETAYNAYRRSSYVLSHTVVGFPSLIVLSLAFALTTFFA
VGLAGGAGGFFFFVAIVLASFWAGSGFATFLSGVVTNVMLGYPVVVSTLAYFLLFSGFFI
NRDRIPRYWIWFHYLSLVKYPYEAVMQNEFSDPTRCFVRGVQMFDNTPLAALPAALKVRV
LRAMSQSLGVDIGTATCITTGPDFLVQQAVTDLTKWDCLWITVAWGFLFRILFYISLLLG
SRNKRR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggttcgtggacaagctgccgttctttgaccggaggtcgtcaccgatggaggag
gccgaggacatcccgcggaacggcctcctgcacgtgcaccaccaccaccaccaccagcag
ccgccgcaccacagcggcctgctcatgcagccgcagccgtcgccgccgacgaagcagtcg
tcgttcacgctcgcgcagctgctcaagcgcgtcaacgaggcgcgcagcgacgcgtcgtcg
cccacgtcctcgcccacgcactctcactacaccatcgagctgggcggctccgtgccgggc
tccaccggcagcgacctgagcgagcacatgcacggcggcggcggggacgggccgctgctg
ccgttcgtgctcaagttcacggacctcacgtacagcgtcaagcagcggaagaagggctcg
tgcctgccgttcggccgcgcgggcggggagacggccgagcccgaggtgcccaggatgaag
acgctgctggacaacatctccggcgaggcgcgggagggcgagatcatggcggtactcggc
gccagcggctccgggaaaagcacgctcatcgacgcgctcgccaaccgcatcgtcaaggag
agcctccacggctccgtcacgctcaacggcgagtcgctcgacggcaacctgctcaaggtc
atctccgcgtacgtgatgcaggacgacctcctgtacccgatgctcaccgtggaggagacg
ctcatgttcgccgccgagttccgcctcccgcgctccctgcccaccaaggagaagaagaag
cgcgtgcaggcgctcatcgaccagctcggcctgcgcaacgcggccggcaccatcatcggc
gacgagggccaccgcggcgtgtcgggcggggagcgccggcgcgtgtccatcggcgtggac
atcatccacgaccccatcgtgctgttcctggacgagcccacctccgggctcgactccacc
agcgccttcatggtggtcaaggtgctgcagcgcatcgcgcagagcggcagcgtggtggtc
atgtccatccaccagccgagctaccgcatcctcggcctcctcgaccgcctcctcttcctc
tcccgcggccagaccgtgtactacggcccgccgggtgcgctgccgtccttcttcgacgac
ttcggcaagcccatcccgggcaacgagaacccgacggagttcgcgctcgacctcatccgg
gagctggagaccatgccggacggggccagggacctcgtcgagcacaacaagaaatggcag
acgcgcatggcgcccaagatgatgaagcaccacgacgacgggaagccgtcgccgtcgctg
tccctcaaggaggccatcagcgccagcatctcgcgcgggaagctcgtgtccggcgcgacc
gacgggtccgtgtcggcgccggcggccgcggtgtccaagttcgcgaacccgttctgggtg
gagatgggcgtcctgacccgccgcgccttcatcaacacgaagcgcacgccggagatcttc
gtcatccgcctggccgccgtgctggtgacggggttcatcctggcgaccatcttctggcgc
ctggacgactcccccaagggcgtggaggagcggctgggcttcttcgccatcgccatgtcc
accatgttctacacctgctccgacgcgctccccgtgttcctgaacgagcgctacatcttc
ctccgcgagacggcctacaacgcgtaccggcggtcctcgtacgtgctctcccacaccgtc
gtcggcttcccgtccctgatcgtgctctccctggcgttcgcgctcaccaccttcttcgcc
gtgggcctggccggcggcgccgggggcttcttcttcttcgtggccatcgtgctggcgtcc
ttctgggccgggtccgggttcgccacgttcctctccggtgtggtgaccaacgtgatgctg
ggctaccccgtggtggtgtcgacgctcgcctacttcctcctcttcagcggcttcttcatc
aaccgcgaccgcatcccgcggtactggatctggttccactacctctcgctggtcaagtac
ccgtacgaggcggtgatgcagaacgagttcagcgacccgacgcggtgcttcgtgcgcggc
gtgcagatgttcgacaacacgccgctggccgcgctgccggcggcgctcaaggtgcgggtg
ctgcgcgccatgagccagtcgctcggggtggacatcgggacggcgacgtgcatcacgacg
gggcccgacttcctggtgcagcaggccgtcacggacctcaccaagtgggactgcctctgg
atcaccgtcgcctgggggttcctcttccggatcctcttctacatctcgctgctgctcggg
agcaggaacaagaggaggtga
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integrated database retrieval system
