Panicum virgatum (switchgrass): 120692066
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Entry
120692066 CDS
T07260
Name
(RefSeq) putative SNAP25 homologous protein SNAP30
KO
K18211
synaptosomal-associated protein 25
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120692066
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
120692066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF5089
TetR_C_12
SUS_N
Motif
Other DBs
NCBI-GeneID:
120692066
NCBI-ProteinID:
XP_039831212
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All DBs
Position
9N:complement(74488481..74491443)
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AA seq
248 aa
AA seq
DB search
MSVPMYKKQNSMGTPVHKTNPFDSDSDSEVPSKPSRAQSVPVQRTDKSVQELEDYAITKA
RETTHKANDCVRAAEAIREDATQTLQTLHRQGEQIMRSHQLAADIERDLTVSEKLLGSLG
GLFSKAWRPKRNQQIKGPVSENNWSVRTANHTEQSWRLGIAPTRQESPSPVQTTPATAME
KIQAEKAKQDDVLSDLSNTLGQLKEMAVDMGTEIDRQNKALVPFSDDVDELNFRLKGANV
QGRRLLGK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccaatgtataagaagcaaaactctatgggcactcctgtccacaagacaaat
ccctttgattccgattctgattctgaagtgccttcaaagccatcaagggcccagtctgtc
ccagtgcaacgcactgataaatctgtgcaagagttggaagattatgctataaccaaagca
cgagaaaccacacacaaagcaaatgattgtgtaagggctgctgaagccatcagggaagat
gctacacaaactctgcaaactttgcaccgtcaaggtgagcagatcatgcggtcgcatcaa
ctagcagctgatattgagagggaccttactgtgagtgagaagctcctgggaagcctgggt
gggctattttctaaggcatggaggcccaagagaaatcaacagataaaaggacctgtctca
gaaaataactggtctgtgaggacggcaaaccacacagaacagagttggaggctaggcatt
gccccaacacgtcaagaatcccccagtcctgtacaaaccacacctgcaactgcgatggaa
aaaattcaggctgagaaagcaaagcaggatgatgtgctttctgacctgagtaacacattg
ggacagctcaaggaaatggcagttgatatgggcacagaaattgacaggcaaaacaaagct
ctggttcctttcagtgatgacgttgatgaactgaatttccgactgaaaggtgcgaatgta
cagggacgccggttgctgggcaagtga
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