Panicum virgatum (switchgrass): 120692117
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Entry
120692117 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 20-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120692117
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120692117
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120692117
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120692117
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120692117
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_7
EF-hand_1
PK_Tyr_Ser-Thr
EF-hand_5
EF-hand_6
EF-hand_8
Kinase-like
SPARC_Ca_bdg
ABC1
Kdo
AIF-1
APH
RIO1
Motif
Other DBs
NCBI-GeneID:
120692117
NCBI-ProteinID:
XP_039831285
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All DBs
Position
2K:complement(61127922..61131562)
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AA seq
541 aa
AA seq
DB search
MGNCCVTAGGAAGEGGGKNKKPKEPKQKGKKPNPFSIEYNRSAPPGAAPRLVVLREPTGR
DIAARYELGGELGRGEFGVTYLCTDRDSGEALACKSISKKKLRTPVDVEDVRREVEIMRH
LPKHPNIVTLRDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAALVTRTIVEVVQM
CHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFTPGERFTEIVGSPYYMAPEVLK
RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSDNAKDL
VRGMLNPDPKQRLTAQQVLDHPWLQNIKKAPNVNLGETVKARLQQFSVMNKFKKHALRVI
AEHLSVEEAADIKDMFEKMDLNKDQMLNFDELKLGLHKFGHQMPDADVQILMEAADADGN
GSLDYGEFVTLSVHLRKIGNDEHLHKAFAYFDRNQSGYIEIDELRESLADDLGQNHEEVI
NAIIRDVDTDKDGKISYDEFAAMMKAGTDWRKASRQYSRERFTSLSLKLQKDGSLQMTST
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactgctgcgtgacggcggggggagccgccggcgagggcggcggcaagaacaag
aagcccaaggagccgaagcagaagggcaagaagccgaaccccttctcgatcgagtacaac
cgctccgcgccgccgggcgccgcgccgcggctggtggtgctgcgggagcccacggggcgg
gacatcgcggcgcggtacgagctgggcggggagctcgggcgcggcgagttcggggtcacc
tacctctgcacggaccgcgactccggggaggcgctggcctgcaagtccatctccaagaag
aagctccgcacccccgtcgacgtcgaggacgtgcgccgggaggtggagatcatgcgccac
ctccccaagcaccccaacatcgtcacgctcagggacacctacgaggacgacaatgccgtg
cacctcgtcatggagctctgcgagggcggggagctcttcgaccggatcgtggcgcggggg
cactacaccgagcgcgccgccgccttggtcacgcgcaccatcgtcgaggtcgtgcagatg
tgccataagcatggagtgatgcacagggatctcaaaccagagaatttcttgtttgcaaac
aagaaagaaacagcggccctaaaagcgattgattttggcctgtctgtatttttcactcca
ggcgaacgattcactgagattgtcggaagtccttattacatggctccagaggtgctaaag
agaaactacggcccagaagttgatgtttggagtgcaggagtgattctttacattcttctt
tgcggcgtccctccattctgggcagaaaccgaacagggtgttgctcaagcaattatccgt
tctgtcattgattttaaaagagacccatggccaagggtctcagataacgcaaaagatctt
gtcaggggaatgctcaatccagatccaaaacaacgattaacagctcagcaagtgcttgat
cacccatggttacagaacattaagaaggctccaaatgtcaatttgggtgaaactgttaag
gccagacttcaacagttctctgtgatgaacaagttcaagaagcatgcacttagggtcata
gctgaacatctttcagtagaagaggctgctgacataaaggacatgtttgagaagatggat
ctaaacaaggatcaaatgcttaattttgatgaactgaagcttggtctgcataagtttggt
caccaaatgcctgatgctgacgtccaaatactaatggaagctgcggatgctgatggaaat
ggatccttggattatggagaatttgttacattatctgtccacctaagaaagattggcaat
gatgagcatctgcataaggcatttgcatactttgaccggaaccagagtgggtatattgaa
atcgatgaactccgtgagtcattagctgatgacctgggacaaaatcatgaggaagttatc
aatgccattatccgtgatgtagacactgataaggatggcaagatcagctacgatgagttt
gcggctatgatgaaggctggaacggactggaggaaagcctcgagacagtactctagagag
cggttcaccagcctgagcttaaaactgcaaaaggacggatcattgcagatgacaagcacc
cggtag
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