Panicum virgatum (switchgrass): 120692124
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Entry
120692124 CDS
T07260
Name
(RefSeq) metacaspase-1-like
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120692124
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120692124
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Motif
Pfam:
Peptidase_C14
C1_1
zf-LSD1
Motif
Other DBs
NCBI-GeneID:
120692124
NCBI-ProteinID:
XP_039831289
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Position
9N:61075873..61077692
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AA seq
386 aa
AA seq
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MPRRAHISADIFTLMGNTRPAGMASARAAAAAPTSWCGHCGMSIAAPSTGPGSSSVRCAF
CHRLARVERHRGMTLAAPSPPRADVVPAGLEVAAGYYPSVSGKKRALLVGVSYRGTAHEL
KGTVNDVKEMRRLLCGKFGFPGDCILELTENERDPARVPTRANLLRAMRWLVECSGSGDS
LVFHFSGHGVQKLDLNDDEVDGYNEALCPADFEQSGKILDDEINETIVRPLGRGVKLHAV
VDTCHSGTILDLPYLCRLSRTGYWQWENHDRPSGARKRPNGGLAISISGCSDDQKSADAS
GFSESSSSSIGAMTDSFIKAVEAEPGTTYGRLLSAMRARIRDGQGSRRLPGRLGSFVRWM
IPSSGVQEPQLCSSEMFDIYRKPFLL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagagcgcatatctccgctgacatcttcaccctcatgggcaacacgaggccg
gccggcatggcgagcgcgagggcggcggcggcggcgccgacgtcgtggtgcggccactgc
ggcatgagcatcgccgcgccgtcgacggggcccggctcctccagcgtccggtgcgcgttc
tgccaccggctggcgcgcgtcgagcgccaccgcggcatgacgctcgcggcgccctcgccg
ccgcgggccgacgtcgtccccgcggggctcgaggtcgcggcgggctactaccccagcgtg
agcggcaagaagcgcgcgctcctcgtcggcgtgagctacaggggcaccgcgcacgagctc
aagggcacggtcaacgacgtcaaggagatgaggcgcctcctctgcggcaagtttgggttc
cccggcgactgcatcctggagctcactgagaacgagagggacccggcgagggtgccgacg
agggcgaacctgctgcgggcgatgcggtggctcgtggagtgctccggcagcggcgactcg
ctggtgttccacttctccgggcacggcgtgcagaagctggacctgaacgacgacgaggtg
gacgggtacaacgaggcgctgtgcccggcggacttcgagcagagcggcaagatcctggac
gacgagatcaacgagaccatcgtccggccgctgggcaggggcgtgaagctgcacgccgtc
gtggacacctgccacagcggcaccatcctcgacctcccctacctctgccgcctgtccagg
acggggtactggcagtgggagaatcacgaccggcccagcggggcgcggaagcgccccaac
ggcggcctggccatctccatcagcggctgcagcgacgaccagaagtccgcggacgccagc
ggattttcggagtcgtcgtcgtcttcgatcggcgccatgacggacagcttcatcaaggcg
gtggaggcggagccggggacgacgtacgggcggctgctgagcgcgatgagggcgaggatc
cgcgacgggcaggggagccgccgcctccccggaaggcttggctccttcgtccgctggatg
atcccgtccagcggcgtgcaggagcctcagctgtgctcgtcagagatgtttgacatctac
cggaagccattcctcctctga
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