Panicum virgatum (switchgrass): 120692125
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Entry
120692125 CDS
T07260
Name
(RefSeq) metacaspase-1-like isoform X1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120692125
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120692125
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Motif
Pfam:
Peptidase_C14
Motif
Other DBs
NCBI-GeneID:
120692125
NCBI-ProteinID:
XP_039831290
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Position
9N:61071809..61074115
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AA seq
379 aa
AA seq
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MGSTRPLGTASSRTAAAWCGHCGAMGLAATPPSGSGSSVWCAFCHRLTRIEQRQRGVGDS
ATATTVALAVASPPWPPTLSAGREIPPGYPKIRGKKRALVVGVSYTGAAHELKGTVNDVA
EMRRLLVGKFGFPSGCILEFTEKERDPSRVPTRENLLLAMRWLTEGCAAGDSLVFLFCGH
GVQEVDLKDDEVDGYNEALCPADFEQSGVILDDEINETVVRPLGRGVKLHAIMDTCHSGT
ILDLPYLCRLSRTGYWQWENQFPGGTGKRPNGGLVISISSCRDDQKSADTSGFPESASIG
AMMDSFIAAVEAEPGTTYGRLLSAMRARIRDGHGSCRLPGRLGSYVRRMIPPSGVQSCVP
HSGLHEHDAGTSAVLFRDV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacgaggccactcggcacggcgagctcgaggacggcggcggcgtggtgcggc
cactgcggcgccatgggcctcgccgccacgccgccgtccgggtccggctccagcgtctgg
tgcgcgttctgccaccggctgacgcgcattgagcagcgacagcgcggtgtgggcgacagc
gccaccgccacgacggtggcgctcgccgtagcctcgcctccgtggccgccgacgctctcc
gcggggcgcgagatcccgccgggctaccccaagatacgcggcaagaagcgcgccctcgtc
gtcggcgtcagctacacgggcgccgcgcacgagctcaagggcacggtcaacgacgtcgcc
gagatgcggcggctcctcgtcggcaagttcgggttcccgagcggctgcatcctggagttc
accgagaaggagagggacccgagcagggtaccgacgcgggagaacctgctcctggcgatg
cgttggctgacggaggggtgcgccgccggcgactcgctggtgttcctcttctgcgggcac
ggcgtgcaggaggtggacctgaaggacgacgaggtggacgggtacaacgaggcgctgtgc
ccggcggacttcgagcagagcggcgtcatcctggacgacgagatcaacgagaccgtcgtc
cggccgctgggcaggggcgtcaagctgcacgccatcatggacacctgccacagcggcacc
atcctcgacctcccctacctctgccgcctgtccagaacggggtactggcagtgggagaat
cagttccctggtgggacggggaagcgccccaacggcggcctggtcatctccatcagcagc
tgcagagacgaccagaagtccgcggacaccagcggattccccgagtcggcatcgatcggc
gccatgatggacagcttcatcgcggccgtggaggccgaaccagggacgacctacgggcgc
ctgctgagcgcgatgagggcgaggatccgcgacggccatgggagctgccgcctccccgga
cggctcggctcgtacgtgcgcaggatgatcccgcccagcggcgtgcagtcctgtgtccct
cactccggactgcatgaacatgatgcaggaacctcagctgtgctcttcagagatgtttga
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