Panicum virgatum (switchgrass): 120692142
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Entry
120692142 CDS
T07260
Name
(RefSeq) protein NRT1/ PTR FAMILY 6.3-like
KO
K26549
MFS transporter, POT/PTR family, nitrate transporter
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120692142
Transporters [BR:
pvir02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
120692142
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Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
120692142
NCBI-ProteinID:
XP_039831318
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Position
9N:complement(53929137..53934360)
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AA seq
590 aa
AA seq
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MASFLPETASDGKALTDAWDYKGRPASRATTGGWGCAAMILGAELFERMTTLGIAVNLLP
YMTGTMHLGNAAAANTVTNFIGTSFMLCLLGGFVADSYLGRYLTIAIFTAVQATGVMILT
ISTAAPGLRPPPCSDAKGASPDCVPANGTQLGVLYLGLYLTALGTGGLKSSVSGFGSDQF
DEAHDGERGKMLRFFNWFYFFVSIGALLAVTVLVYVQDNVGRRWGYGICAAGILVGLAVF
LLGTRRYRFKKLVGSPLTQVAAVTVAAWNKRALPVPSDPDMLYDVDDAAAAGADVKGKQK
LPHSKECRFLDHAAIVDGESPVAASKWRLCTRTDVEEVKQVVRMLPIWATTIMFWTIHAQ
MTTFSVAQAQLMDRGIGGSGFLIPAGSLTVFLIGSILLTVPLYDRLVAPVARRLTGNPHG
LTPLQRVFVGLFLSIAGMAAAALVERHRQATSGRGATITVFLLMPQFVLVGAGEAFTYMG
QLSFFLRECPKGMKTMSTGLFLSTCALGFFFSTLLVTIVDKVTGHGAHGGWLADNLNYGR
LDYFYGLLAVISAINLVLFTLAARGYVYKDKRLADAGIELADEEAIAVGH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttttctgccggagaccgcgtcggatggcaaggctctgacggacgcctgggac
tacaagggccggccggccagtcgcgccaccaccggtggatggggttgcgccgccatgatc
ctaggagcggagctgttcgagcggatgacgacgctgggcatcgcggtgaacctgctgccg
tacatgaccggcacgatgcacctcggcaatgccgccgccgccaacacggtcaccaacttc
atcggcacctccttcatgctctgcctccttggcggcttcgtcgccgacagctacctcggc
cgctacctcaccatcgccatcttcaccgccgtgcaggccacgggcgtgatgatcctgacc
atctcgacggcggcgccggggctgcggccgccgccgtgctcggacgccaagggcgcgagc
cccgactgcgtgccggccaacgggacgcagctcggggtgctgtacctgggcctgtacctg
acggcgctgggcacgggcgggctcaagtccagcgtgtccgggttcgggtcggaccagttc
gacgaggcgcacgacggcgagcgcggcaagatgctgcgcttcttcaactggttctacttc
ttcgtcagcatcggcgcgctgctggccgtcacggtgctggtgtacgtgcaggacaacgtg
ggccgccgctggggctacggcatctgcgccgccggcatcctcgtcgggctcgccgtcttc
ctgctgggcaccaggaggtaccggttcaagaagctggtggggagcccgctgacccaggtg
gccgccgtgacggtcgccgcctggaacaagcgcgcgctgccggtgccgtccgacccggac
atgctctacgacgtggacgacgcggctgccgccggcgccgacgtcaaggggaagcagaag
ctgccccacagcaaggagtgccggttccttgaccacgcggcgatcgtcgacggcgagtca
ccggtggcggcgagcaagtggaggctgtgcacgcggacggacgtggaggaggtgaagcag
gtggtgcggatgctgcccatctgggccaccaccatcatgttctggaccatccacgcgcag
atgaccaccttctcggtggcgcaggcccagctcatggaccgcggcatcggcggctcgggc
ttcctcatccccgcgggctccctcaccgtcttcctcatcggctccatcctcctcaccgtg
cccctctacgaccgcctcgtcgcgcccgtggcgcgccgcctcacgggcaacccgcacggc
ctcaccccgctccagcgggtcttcgtcggcctcttcctctccatcgccggcatggccgcc
gccgcgctcgtcgagcgccaccgccaggccacctccggccgcggcgccacgatcaccgtc
ttcctgctcatgccgcagttcgtgctcgtcggcgccggcgaggcgttcacgtacatgggc
cagctctccttcttcctgcgcgagtgccccaagggcatgaagaccatgagcacggggctc
ttcctcagcacctgcgcgctcggcttcttcttcagcacgctgctcgtcaccatcgtcgat
aaggtcacgggccacggcgctcacgggggatggctcgcggacaacctcaattacggcagg
ctcgactacttctacgggcttctcgccgtgatcagcgccattaaccttgtcctcttcacc
ctcgccgccaggggatacgtctacaaggacaagcgcctggctgacgccggcattgagctt
gccgacgaggaggccattgccgtcggccactga
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