KEGG   Panicum virgatum (switchgrass): 120692176
Entry
120692176         CDS       T07260                                 
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00260  Glycine, serine and threonine metabolism
pvir00460  Cyanoamino acid metabolism
pvir00630  Glyoxylate and dicarboxylate metabolism
pvir00670  One carbon pool by folate
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
pvir01230  Biosynthesis of amino acids
pvir01240  Biosynthesis of cofactors
pvir04981  Folate transport and metabolism
Module
pvir_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    120692176
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    120692176
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    120692176
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    120692176
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    120692176
Enzymes [BR:pvir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     120692176
SSDB
Motif
Pfam: SHMT Aminotran_1_2
Other DBs
NCBI-GeneID: 120692176
NCBI-ProteinID: XP_039831351
LinkDB
Position
9N:complement(8549153..8553700)
AA seq 515 aa
MAMATALRKLSANALRRHQPLSRITPLYYMASLPAREERSSITWPKQLNAPLEEVDPEIA
DIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES
LCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQ
TDTKKISATSIFFETMPYRLDESTGLIDYDQLEKSAVLFRPKLIIAGASAYARLYDYDRM
RKICNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVK
EINKHGKEVMYDFEDKINAAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVISNS
AKFAQSLVAKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLETVHIAANKNTVPGDVSA
MVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLAVKVKAATTGGTKLKDFVATLQSD
SKIQAEIAKLRHDVEEFAKQFPTVGFEKETMKYKN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggccatggcgacggctctccgaaagctctccgccaacgcgctccgccgccaccagccg
ctctcccgcatcacgccgctctactacatggcgtccctgccggcgagggaggagagatcc
agtattacctggccaaagcagttgaacgcgccgcttgaagaggtcgaccccgagattgct
gacatcatcgagctcgagaaggcccgccaatggaaggggctggagctaatcccgtcggag
aatttcacgtcggtgtcagtgatgcaggcggtgggttccgtcatgaccaacaagtacagc
gaggggtaccccggcgcgagatactacggtgggaatgaatacattgatatggctgaatcc
ttgtgtcagaaacgtgctttggaggctttccgcttggacccagcgaagtggggagtgaat
gtgcaacctctatcaggttcacctgccaacttccaggtgtacactgcgctattgaagcca
catgaaaggatcatggctttggatcttccacacggtggacatctttctcatggttaccag
actgacactaagaagatttcggcaacttcgatattctttgagacgatgccctacagattg
gatgaaagcactggcttaattgattacgatcagttggagaaaagtgcagttcttttcagg
ccgaagttgatcatagctggtgcgagtgcatatgctcgcctatatgattatgatcgtatg
cggaagatatgcaacaagcagaaagcaatacttctagcagacatggcacatatcagtggg
cttgttgcagctggcgtcattccatctccttttgattatgcagatgtagtgactaccact
actcacaagtcacttcgtgggccacgtggagccatgatattttacaggaagggagtgaaa
gaaataaataagcatggaaaagaggttatgtatgattttgaggacaagatcaacgctgcc
gtctttccaggtttgcaaggtgggcctcataaccataccattactggcttagctgttgcg
cttaagcaggcaactactccagagtaccgagcttatcaagagcaagttatcagtaacagt
gctaaatttgcacagagcttggtagcaaaaggatacgagcttgtctctggtggaactgat
aaccatttggtccttgttaacctcaagaataaggggatagatggttcaagggtggagaag
gttttagaaactgtgcatattgcagcaaacaagaacactgttcctggcgatgtttcagct
atggtaccaggaggcatcaggatgggaaccccagctcttacatccagaggatttgtggag
gaagatttcgctaaggttgctgacttctttgatgcagcagtgaacttggctgtgaaggtt
aaggctgcaacgacaggtggaacgaagctgaaggactttgttgccaccttgcaatctgat
agcaaaatccaagctgagattgcaaagcttcgccatgacgtggaggaatttgcaaaacag
ttcccaacagttggatttgagaaagagaccatgaaatacaagaactaa

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