Panicum virgatum (switchgrass): 120692201
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Entry
120692201 CDS
T07260
Name
(RefSeq) bet1-like protein At1g29060 isoform X1
KO
K08505
protein transport protein SFT1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120692201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120692201
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[C] (Qc)
Sft1
120692201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM-like_2
Dynamitin
AI-2E_transport
SlyX
Motif
Other DBs
NCBI-GeneID:
120692201
NCBI-ProteinID:
XP_039831379
LinkDB
All DBs
Position
9N:complement(76402848..76405744)
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AA seq
124 aa
AA seq
DB search
MANSSYGSREGLTVRPAASSSSSEISLQIDPINADLDDHILGLRGQVRKLRGVAQEIQSE
AKYQNDFISQLQMTLTKAQAGVKNNMRRMNKSIIQNGSSHLVHVVLFALGCFFLVYLVSK
FSRR
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagctcctacggctcgagggaagggctgacagtcaggcctgctgcatcatca
agctccagcgagatttcgctccagatcgacccaatcaatgctgatctggatgatcatatc
ctcggacttcgtggacaagtccgcaagctaagaggagttgctcaggagatacaatcagag
gccaagtatcaaaatgatttcatatctcagttgcaaatgactctgacgaaggcccaggca
ggggtcaagaacaacatgaggcgaatgaacaagagcatcatacagaacggttcaagccat
cttgttcatgtggtcctgtttgcccttggctgcttctttctagtgtaccttgtgtccaaa
ttctcccggagatga
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