Panicum virgatum (switchgrass): 120692226
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Entry
120692226 CDS
T07260
Name
(RefSeq) 19.0 kDa class II heat shock protein-like
KO
K13993
HSP20 family protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120692226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120692226
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP20
120692226
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GFIT
Motif
Pfam:
HSP20
ArsA_HSP20
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
120692226
NCBI-ProteinID:
XP_039831444
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Position
1K:complement(10553263..10554137)
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AA seq
187 aa
AA seq
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MEFSFGGFGDPVLSVALQQLMDLPDELERQLNAPTRAYVRDRRAMANTPMDVKELPSGAL
VLAVDMPGVSLADVRVQVEDGNVLTISGERKRPPEDAVGAEADKQQQQQQGADGGAGEKQ
GVRYLRMERRMGKFMRRFPLPESADLDSIRAEYKDGVLTVTVDKKPPPEPKKPRVVQITD
GGDHQGK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggagttctcgttcggcggcttcggcgacccggtgctgtcggtggcgctgcagcagctg
atggacctccccgacgagctggagcggcagctgaacgcgccgacgcgcgcctacgtgcgc
gaccgccgcgccatggccaacacgcccatggacgtcaaggagctcccctccggcgcgctc
gtgctcgccgtcgacatgcccggggtcagcctcgccgacgtcagggtccaggtcgaggac
ggcaacgtgctcaccatcagcggcgagcgcaagcgcccgcccgaggacgccgtcggcgcc
gaggccgacaagcagcagcagcagcagcagggcgccgacggaggcgccggcgagaagcag
ggggtgaggtacctgcggatggagcggcggatgggcaagttcatgcggcggttcccgctg
ccagagagcgccgacctggacagcatcagggccgagtacaaggacggcgtgctcaccgtc
accgtcgacaagaagcccccgccggagcccaagaagccacgcgtcgtccagatcaccgac
ggcggcgaccaccagggtaagtga
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