Panicum virgatum (switchgrass): 120692320
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Entry
120692320 CDS
T07260
Name
(RefSeq) phospholipase D alpha 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120692320
00565 Ether lipid metabolism
120692320
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120692320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120692320
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120692320
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120692320
Endosome - Golgi transport
Others
Others
120692320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
PLDc_2
C2
DUF6209
CCD48
Motif
Other DBs
NCBI-GeneID:
120692320
NCBI-ProteinID:
XP_039831523
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All DBs
Position
9N:complement(60882441..60887991)
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AA seq
834 aa
AA seq
DB search
MGEPQTTQLLLHGVIDARIVAADLSVTSDGQLQPTKKIQMKRKVFSWIRKLPFCKCKQPL
ENAIGLGMDGKLYATVDIDKARVGRTRMLEPVPSPRWNESFRIYCAHDASNIIFTVKADN
AVGATLIGRAYLPTKDVVAGGKVERWLDICDEKRQPLGGGDKIHVQLQFTDVAADPGGGW
GTGVGSAAYRGVPRTFFEQRRGCRVRLYGDAHIADGFAPRVALAGGGMYEPRRCWVDVFE
AINAARRMVYIAGWSVNSDVQLVRDPRQPSSETLGQLLIRKADEGVTVLMLVWDDRTSVG
LGPIKRDGLMATHDDDTAGFFRGTKVHCVLCPRNPDKDRSYVQDVETATMFTHHQKTVIV
DGGGPNAPPGLVSFLGGIDLCDGRYDTQEHPLFRTLGTTHNKDFHQPNFPGASIRKGGPR
EPWHDVHCRVEGPAAWDVLDNFEQRWRKQGSGDNLLVTLDKGWASREAAASRDAESWNVQ
VFRSIDGGAAAGFPENRDEAPDEAAARGLVSGKDHVIERSIQDAYIHAIRRARDFIYIEN
QYFLGSSYAWRQNDGVTVEAINALHLIPKELSLKIVSKIEAGERFAVYVVVPLWPEGVPE
SGSVQAILDWQRRTMEMMYRDITLAIRAKGLQADPRDYLTFFCLGNREAPAPGEYAPPER
PDPDTDYERAQQARRFMIYVHAKTMIVDDEYVIVGSANINQRSMDGGRDTEIAMGAYQPS
YLATRARPARGQVHGFRVALWQEHLGQAAAAAAGDLLLRPSNLACVRRMNQVAQQHWDMF
ASDTFQGDLPGHLMAYPIVVGDEGKITAMTQQFPDTKAKVLGSKSNVLPPILTT
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggagagccacagacgacgcagctgctgctgcacggggtgatcgacgccaggatcgtg
gcggccgacctgtccgtcacgtcagacggccagctgcagccgaccaagaagattcagatg
aagaggaaggtcttctcatggatcaggaagctgcccttctgcaaatgcaagcagccgctg
gagaacgccatcggcctcggcatggacggcaagctgtacgcgacggtggacatcgacaag
gcgcgcgtcgggcggacgcgcatgctggagcccgtcccctccccgcggtggaacgagtcc
ttccgcatctactgcgcgcacgacgccagcaacatcatcttcaccgtcaaggccgacaac
gccgtcggcgccacgctcatcggccgcgcctacctgcccaccaaggacgtcgtcgccggc
gggaaggtggagcggtggctcgacatctgcgacgagaagcggcagcccctggggggcggg
gacaagatacacgtccagctccagttcacggacgtcgcggcggacccggggggcggctgg
ggcaccggcgtcggcagcgccgcgtacaggggcgtcccgcgcaccttcttcgagcagcgc
cgcggctgccgggtgcggctgtacggggacgcgcacatcgccgacggcttcgcgccgcgt
gtcgcgctcgccggcggcgggatgtacgagccgcgccggtgctgggtggacgtgttcgag
gcgatcaacgccgcccggcggatggtgtacatcgccgggtggtccgtgaacagcgacgtc
cagctggtgcgcgacccgcggcagccgtcgtcggagacgctcggccagctgctcatccgc
aaggccgacgagggcgtcacggtgctgatgctggtgtgggacgaccggacgtctgtgggg
ctcggcccgatcaagcgcgacgggctgatggccacgcacgacgatgacacggcgggcttc
ttccgcggcaccaaggtgcactgtgtgctctgcccgcggaatcccgacaaggaccggagc
tacgtgcaggacgtcgagacggccaccatgttcacgcaccaccagaagacggtgatcgtc
gacggcggcggccccaacgcgccgccgggcctggtgagcttcctcggcggcatcgacctg
tgcgacgggaggtacgacacgcaggagcacccgctgttccgcacgctgggcaccacgcac
aacaaggacttccaccagcccaacttccccggcgcgtccatcagaaagggcgggcccagg
gagccgtggcacgacgtccactgccgcgtcgagggcccggcggcgtgggacgtgctcgac
aacttcgagcagcggtggcggaagcagggcagcggcgacaacctcctggtcacgctggac
aaagggtgggcgtcgcgcgaggcggccgcctcgcgcgacgccgagtcctggaacgtgcag
gtgttccggtccatcgacggcggcgcggcggcggggttcccggagaaccgcgacgaggcc
cccgacgaggccgcggcgcgcggcctggtgagcggcaaggaccacgtgatcgagcgcagc
atccaggacgcgtacatccacgccatccgccgcgcgcgggacttcatctacatcgagaac
cagtacttcctggggagctcctacgcgtggcggcagaacgacggcgtcacggtggaggcc
atcaacgcgctgcacctcatccccaaggagctgtcgctcaagatcgtgagcaagatcgag
gccggcgagcggttcgccgtgtacgtggtggtgcccctgtggccggagggcgtgccggag
agcggctccgtgcaggccatcctggactggcagcgccgcaccatggagatgatgtacagg
gacatcacgctggccatccgcgccaagggactccaggccgaccccagggactacctcacc
ttcttctgcctcggcaaccgcgaggcgccggcccccggcgagtacgcgccgccggagcgg
ccggaccccgacaccgactacgagagggcgcagcaggccaggcgcttcatgatctacgtc
cacgccaagacgatgatcgtcgacgacgagtacgtcatcgtggggtcggcgaacatcaac
cagcgctccatggacggcggccgcgacacggagatcgcgatgggcgcgtaccagccgagc
tacctggcgaccagggcccggccggcgagggggcaggtccacggcttccgggtcgcgctg
tggcaggagcacctgggccaggcggccgcggcggcggcgggagacctcctcctccggccg
tcgaacctggcttgcgtgcgccggatgaaccaggtggcgcagcagcactgggacatgttc
gcgagcgacacgttccagggcgacctccctgggcacctcatggcgtacccgatcgttgtg
ggcgacgagggcaagatcacggcgatgacacagcagttcccggacaccaaggcgaaggtg
ctcggcagcaagtccaacgtcctcccgcccatcctcaccacatga
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