Panicum virgatum (switchgrass): 120692448
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Entry
120692448 CDS
T07260
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120692448
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120692448
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120692448
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120692448
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120692448
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
120692448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
120692448
NCBI-ProteinID:
XP_039831688
LinkDB
All DBs
Position
9N:76977282..76980146
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AA seq
246 aa
AA seq
DB search
MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL
LDQTSVTHLFPITKFIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD
KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE
KKMKDDPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDCAFRALTTEEIDQHLT
AISERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcggcacaggcgcgggatacgaccgccacatcaccatcttctcccccgagggc
cgcctctaccaagtcgagtacgccttcaaggcggtcaagtcggcgggggtcacgtcgatc
ggcgtccgcggcaaggactccgtctgcgtcgtcacccagaagaaagtgccggataagttg
ttggatcagacgagcgtgacgcacctgttcccaatcaccaagttcatcggattgcttgcc
actggccttacagctgatgcaaggtcgttggtttaccaagcaaggaatgaagcagctgag
tttcgcttcaaatggggttatgagatgcctgtagatgtgttagcgaaatggatcgctgac
aaagcgcaagtttacacgcagcatgcctacatgagaccccttggcgtagttgctatggtc
ttgggctatgacgaagagaaaaatgctcaactcttcaagtgtgaccctgctggtcacttc
tttggacacaaggcaactagtgccgggcttaaggagcaagaagcaataaattttcttgag
aagaaaatgaaggatgatccacaattcacctatgacgaaactgttcagattgcaatctct
gcgttgcaatcagttctccaggaagatttcaaggccacggagatcgaggttggtgttgtg
aggaaagaagactgtgctttcagagcgctcacaacagaggagatcgatcagcacctgacg
gccattagtgaacgggactga
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integrated database retrieval system
