Panicum virgatum (switchgrass): 120692521
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Entry
120692521 CDS
T07260
Name
(RefSeq) metacaspase-1-like
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120692521
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120692521
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Motif
Pfam:
Peptidase_C14
zf-LSD1
Zn_ribbon_FGT1_1
zf-Sec23_Sec24
Zn_ribbon_FGT1_2
Zn_ribbon_NUD
Motif
Other DBs
NCBI-GeneID:
120692521
NCBI-ProteinID:
XP_039831786
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Position
9N:61054863..61059169
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AA seq
372 aa
AA seq
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MASARPPARTVWCARCGAYLSVAPGARSVRCALCHSVTRVERRPQHGLHHATVGFIKGLI
NAFAPPPSSAASSFAQLPASYPRARGCKKRALLVGISYAGTRYELKGAVNDVNCMGYLLR
ERFGFPADCILVLTQEDGDPYRVPTRANLTRALRWLVDGAAAGDSLVFHFSGHGVQKLDS
NGDEADGYDEALCPVDFEDPRGGVILDDEINATIVRPLGRGVKLHAIVDTCHSGTILDLP
YLCRLSRTGYWEWENQQTRFSSEQKCTSGGLAISISGCGDSQTSQDTTAFSGSTSTGAMT
YSFIKAVESEPGTTYGRLLTAMRATIRDNGGEFGIPGPIGTFFRRVITFSCAQEPQLCAS
ETFDIYRKPFLL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcgcggccgccggcgcgcacggtgtggtgcgcccgctgcggcgcgtacctg
tcggtggcccccggggcgcgctccgtgcggtgcgcgctctgccactccgtcacgcgcgtc
gagcgccgcccgcagcacggcctgcaccacgccaccgtggggttcatcaagggcctcatc
aacgccttcgcgccgccgccctcctccgcggcgtcgtcgtttgcccagctgccggcgagc
tacccgcgcgcccgcggctgcaagaagcgcgcgctcctcgtggggatcagctacgccggc
acccggtacgagctcaagggcgccgtcaacgacgtcaactgcatgggctaccttctccgc
gagcgcttcggcttcccggccgactgcatcctcgtcctcacgcaggaggacggggacccg
taccgggtgccaacgagggcgaacctgacgcgtgcgctgcggtggctcgtggacggcgcc
gccgccggggactccctggtgttccacttctccgggcacggggtgcagaagctggacagc
aacggcgacgaggcggacggctacgacgaggcgctgtgcccggtggacttcgaggacccc
cgcggcggcgtcatcctggacgacgagatcaacgccaccatcgtccggccgctcggcagg
ggcgtgaagctgcacgccatcgtggacacctgccacagcggcaccatcctcgacctcccc
tacctctgccgcctgtccaggaccgggtactgggaatgggagaaccagcagacccggttc
tccagcgagcagaaatgcaccagcggcggcctcgccatctcgatcagcggctgcggcgac
agccaaacctcgcaagacaccacggcgttctcgggctccacctcgacgggcgccatgacg
tacagcttcatcaaggcggtggagtcggagccgggcaccacctacggccgcctgctgacg
gcgatgagggccaccatccgcgacaacggcggcgagttcggcatccccggccccatcggc
accttcttccgccgggtcatcaccttcagctgcgcgcaggagccccagctgtgcgcttcg
gaaacgttcgacatctacaggaagcccttcctcttgtga
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