Panicum virgatum (switchgrass): 120692564
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Entry
120692564 CDS
T07260
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120692564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120692564
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120692564
Pre-60S particles
120692564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
HEAT_2
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
RIX1
IFRD
INTS7_N
MMS19_C
Arm
Adaptin_N
Cnd1
HEAT_Maestro
TPR_TNPO3_IPO13_3rd
Htt_N-HEAT_1
ARM_ARMC5
HEAT_GCN1
PPP2R1A-like_HEAT
Phasin_2
Motif
Other DBs
NCBI-GeneID:
120692564
NCBI-ProteinID:
XP_039831827
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All DBs
Position
2K:complement(61780279..61788901)
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AA seq
1126 aa
AA seq
DB search
MASAEDQAAAAALLGGDPAAFDALLSTLMSSSNTDRSAAEAAFHRLRASHPEPLALRLAS
SLASPATPADLRAMAGVLLRKVLSPTPSSDASANNATPPAPLWPQLSPAGQSALKAHLLA
ALQSDPPKPIAKKVCDAISELAASLLPENAWAELLPFLFRAASGPEAPNLQESALLIFAR
LADYIAESLLDHLMTIHNLLAAALAHPTSPDVRIAALGAAVNLVQCLPTNADRDKMQDLL
PAMMRALTDCLNSGQEASAQEALELLVELAGAEPRFLRRQIADVVGAMLQVAEAAQLEDG
TRHLAVEFVITLAEARERAPGMMRRLPQFVGRLFAVLMQMLLDVEDDPSWHSAETEDEDA
GEGNNYGVAQECLDRLAIAIGGNAIVPIASELLPQYLSAPEWQKHHAALITLAQIAEGCA
KVMLKNLEQVVSMILNGFQHPHPRVRWAAINAIGQLSTDLGPDLQVHYHQKVLPALANAM
DDFQNPRVQAHAASAILNFSENCTPEILTPYLDGIVNKLLVLLQNGKQMVQEGALTALAS
VADSSQEHFKKYYDAVMPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKDKFRDDAR
QVMEVLMALQGTPMETDDPITSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDV
TITSAESDDEIESDDDSIETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFFPWI
DQVAPTLVPLLKFYFHEEVRRAAVAAMPELLRSAKLAVEKGQAQGRDESYVKQLSDYIIP
ALVEALHKEPETEMCSSMLDSLNECMQLSGRLLDETQVRAISDEIKNVIIASATRKRERT
ERTKAEDFDADEGELLKEENEQEEEVFDQVSECLGTLIKTFKASFLPFFDELSVYITPML
GKDKTPEERRIAICIFDDVAEQCRESALRYYDTYLPFLLEAANDENSDVRQAAVYGVGVC
AEFGGHVFRPLVGEALSKLNNVIRHPEARHPDNIMAYDNAVSALGKICQFHRDGIDATQV
VPAWLSCLPIKDDKIEAKVVHEQLCSMVERSDAEILGPQNQYLPKILSIFTEVLGNGTEL
ATDETKKKMVNIVRRFQQTLPPDFLASVFSNLQPQQQLLLQSILST
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccgaggaccaggccgcggccgccgcgctgctggggggcgacccggcggcg
ttcgacgcgctgctgtcgaccctcatgtcgtcctccaacaccgaccgctccgccgccgag
gccgccttccaccgcctccgggcctcgcacccggagcccctcgcgctgcggctcgcctcc
tcgctcgcgtcgcccgccaccccagccgacctccgcgccatggcgggggtcctgctacgc
aaggtcctctccccgacaccgtcctccgacgcctccgccaacaacgccacgcccccggcg
cccctctggccgcagctctcccccgccggccagtccgcgctcaaggcgcacctcctcgcc
gcgctccagtccgaccccccgaagcccatcgcgaagaaggtctgcgacgccatctccgag
ctcgccgcctcgctgctgcccgagaacgcgtgggccgagctgctcccgttcctcttccgc
gcggcatccgggcccgaggcgcccaaccttcaggagtcggcgctgcttatcttcgcgagg
ctggcggattacatcgccgaatcgcttctcgaccatctgatgactatccacaacctgctt
gccgccgctctggcgcatcccacgtcccccgatgtgcgtattgcggccctgggtgccgca
gtcaacctcgtccaatgcctgcccaccaacgccgatcgggataagatgcaggatttgctc
ccggcaatgatgagggcgctcacggattgcctgaactctggccaggaggcctctgcgcag
gaggcactggagctgcttgttgagctggctggtgcagagccaaggttcctacgacggcag
attgcggatgtggtaggggcaatgctacaagtcgctgaggctgcacagctggaggatggg
accaggcacttggcggttgaatttgtcattactcttgctgaggcaagggagcgtgcacct
ggaatgatgcggcgactcccacagtttgtcggcaggctgtttgcagtgctgatgcagatg
ctgcttgatgttgaggatgacccttcttggcactctgctgaaactgaagatgaagatgca
ggtgaagggaacaactatggagtggcacaggagtgccttgaccgccttgccatcgccatt
ggtggaaacgcaattgtgccaattgcatctgagctgcttccacagtacctgtctgctcct
gagtggcaaaagcaccatgctgcgctcataacactcgcacagattgcagaaggatgtgca
aaggttatgcttaaaaatttggaacaagttgtttcgatgatattgaatggattccaacat
cctcacccacgcgtgagatgggctgcaatcaatgcgattggccagctctccacggatttg
gggccagacttgcaagttcattaccaccagaaggtgctgcctgcattggcgaatgctatg
gatgatttccagaacccacgagttcaggcacatgccgcatcggccatcctgaacttcagc
gagaactgtacgccagaaattttgacaccttacctggatggaattgtcaacaaattactt
gttcttcttcagaatggcaagcaaatggtgcaagagggagcattgacagctctagcttca
gtagcagattcatcacaggagcacttcaagaaatactatgatgctgtcatgccataccta
aaagctattttgatgaatgctactgacaagtctaataggatgctccgtgccaagtccatg
gagtgtattagtttggtaggaatggctgtgggtaaagacaagttcagagacgatgcaagg
caggttatggaagtacttatggctttgcaaggaactccaatggaaactgatgatccaatt
acaagctacatgttgcaggcttgggccaggctatgcaaatgtcttgggcaggatttcctt
ccttacatgagtgttgttatgccaccacttcttcagtctgctcaactgaagcccgatgtg
acaattacttcagctgaatcagatgatgaaatagaatcagatgacgatagcattgaaact
atcactcttggtgacaagaggataggaatccgaactagtgtgctggaagagaaagcaacg
gcttgcaacatgctgtgctgttatgctgatgagctcaaggagggtttcttcccatggatt
gatcaggttgcccccacattggtccctctgctgaagttttacttccatgaagaagtcagg
agagctgctgttgcggcaatgccagaactcttacgttcggccaaattggctgttgagaag
gggcaggctcaaggccgtgatgagtcttatgttaaacagttgtctgactacataattcca
gctcttgttgaagcacttcacaaggagccagaaacagaaatgtgctcatccatgctggat
tcattaaatgagtgtatgcagctttctggtcgtttgcttgatgaaacccaagtccgagct
atttcggatgagattaaaaatgtcattatagccagcgcaaccaggaaaagggaacgcaca
gaaagaacaaaagcagaagattttgatgctgatgaaggagagctactcaaagaggagaat
gaacaagaggaggaagtatttgatcaggtgagcgagtgccttggaactttgattaagacc
ttcaaagcttctttcttgccgttctttgatgagctctcagtgtacattacgccaatgttg
ggaaaagataaaacacctgaggagagaaggatagctatctgtatatttgatgatgttgcg
gagcaatgccgtgaatcagctttgaggtattatgatacataccttcctttccttttggag
gcagcaaatgatgagaattcagatgttcggcaggctgctgtctatggtgtgggtgtatgt
gctgagtttggtggtcatgtttttcgccccctagttggagaggccctatcaaaattgaac
aatgtcatccgacatccagaagcacgacatccagacaacattatggcatatgataatgct
gtttcggcacttgggaaaatatgtcaatttcatcgggatggtattgatgcgacccaggtt
gttccagcctggcttagttgcttgcctataaaagatgacaagattgaagctaaagttgta
catgagcaactttgctcaatggtggagaggtcggatgcagaaattcttggccctcaaaat
cagtatcttcctaaaattctttcaatttttaccgaggttttgggtaatggaactgagctt
gctacagatgaaacaaaaaaaaagatggtcaatattgtgaggcgattccagcagactcta
cctccagattttctcgcgtcagtattttccaacttgcaaccgcagcaacagctcctccta
cagtccattctatcgacatag
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