Panicum virgatum (switchgrass): 120692615
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Entry
120692615 CDS
T07260
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120692615
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120692615
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
HDA2-3
DUF3283
Motif
Other DBs
NCBI-GeneID:
120692615
NCBI-ProteinID:
XP_039831917
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All DBs
Position
9N:complement(82859352..82876398)
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AA seq
411 aa
AA seq
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MSVLRKELQTLLSFTGGLSRHQSLQNIVIQLRKACSHPYLFSGIEPEPYVEGEHLVQASG
KLILLDLILKKLHGHRVLLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFAAIRNF
SSQSTKGLMGDDNQIGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHR
MGQLNHVLSINLVSQRTIEEVIMQRAERKLKLSHNIIGDDARTDLKGGDLGNEASDMRSI
IFGLHLFDPVDTTIETINEDTTSDTINVEKLAKLKTMSEKVVMMRSHEPSEKDEQSFEIN
PNFADGLGTVIRRASDSISVDLGLNEAAYLSWVKKFKEASHSIEDATAQHGRQRAAPEEK
FLKREVNKKKVEEKRFVKWKTLGTRWRSSPTTPRIFGGSRCTPSRGTFHWG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgttgcggaaagagctgcaaacacttctttcgtttactggaggattgtctcgc
caccagtctttgcagaacattgttatacagctgaggaaagcttgcagtcacccatatctg
ttcagtggcattgaacctgagccttatgtggaaggggagcatttagttcaggctagtggg
aagctcattttgctggatcttattctgaagaagctccatggacatcgtgttttgctattt
gctcagatgacccaaacactggacattcttcaggatttcctggagctgcgcaattacact
tatgagcgcctggatggttcagtacgtgctgaggagcggtttgcagcaataagaaatttc
agctctcaatccaccaaaggccttatgggagatgataatcagattggagcttttgttttc
atgatatcaactagagcagggggtgtggggcttaatctcattggtgctgatactgttatc
ttttacgaacaagattggaatcctcaagctgacaaacaggccctacagcgcgctcaccgt
atgggacagttaaatcatgtgctgtcaataaatttggtgtcccagcgtacaattgaagag
gtcataatgcaaagagccgagagaaaacttaagcttagccacaatattattggagacgat
gctagaactgatttgaagggtggagatctgggaaatgaagctagtgacatgagatcaatt
atctttggcttgcacctgttcgatcctgttgatacaaccatagagacaatcaatgaggac
acaacttctgacacaatcaatgtggagaaactggcaaagttgaaaacaatgtctgaaaag
gttgtaatgatgcgtagccatgaaccttcagaaaaggatgaacaatcatttgaaatcaac
ccaaattttgctgatggccttggaactgtaattagaagggcttctgattctattagtgtt
gatcttgggcttaatgaagctgcatacctatcctgggttaagaagttcaaagaggcttcg
cattcaattgaagatgccacagctcaacatggaaggcaaagagcagcgccagaagaaaag
ttcctgaaacgtgaagttaacaagaaaaaagtagaagaaaagaggtttgtcaaatggaaa
actttgggtacgcggtggcggagttccccaacgaccccgaggatctttggaggatcaaga
tgcaccccgagccggggtacatttcactggggttaa
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